RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TDP2O95551 362 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 MCTP2Q6DN12 878 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 ADAT2Q7Z6V5 191 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.971e-9■■■□□ 17.6
CD46-208ENST00000367042 AK8Q96MA6 479 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 TLR10Q9BXR5 811 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 CAMTA2O94983 1202 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 GUCY2CP25092 1073 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 KLRC1P26715 233 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 HNRNPH1P31943 449 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 CTNNA1P35221 906 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 TNNC1P63316 161 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 NBPF5PQ86XG9 351 aaPredicted RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 DGKHQ86XP1 1220 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 MYOCDQ8IZQ8 938 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 CCDC114Q96M63 670 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 NLRP3Q96P20 1036 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 EYA3Q99504 573 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 PACSIN1Q9BY11 444 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 CUEDC2Q9H467 287 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 LAD1O00515 517 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 BAG3O95817 575 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 LSP1P33241 339 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 PPP1R2P41236 205 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 PICALMQ13492 652 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 FAM83BQ5T0W9 1011 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 KLHDC7AQ5VTJ3 777 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 SH3GLB2Q9NR46 395 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
CD46-208ENST00000367042 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
CD46-208ENST00000367042 MYZAPP0CAP1 466 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 GRM4Q14833 912 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 PDXDC1Q6P996 788 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 INTS5Q6P9B9 1019 aaKnown RBP9.01□□□□□ -0.97
CD46-208ENST00000367042 CCDC121Q6ZUS5 278 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 CCDC91Q7Z6B0 441 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 LRRC47Q8N1G4 583 aaKnown RBP9.01□□□□□ -0.97
CD46-208ENST00000367042 C7orf25Q9BPX7 421 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 DPH5Q9H2P9 285 aa9.01□□□□□ -0.97
CD46-208ENST00000367042 A0A1W2PQJ5 194 aa9□□□□□ -0.97
CD46-208ENST00000367042 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
CD46-208ENST00000367042 ASIC2Q16515 512 aa9□□□□□ -0.97
CD46-208ENST00000367042 DDB1Q16531 1140 aa9□□□□□ -0.97
CD46-208ENST00000367042 UBE2SQ16763 222 aa9□□□□□ -0.97
CD46-208ENST00000367042 UNC13DQ70J99 1090 aa9□□□□□ -0.97
CD46-208ENST00000367042 SCLT1Q96NL6 688 aa9□□□□□ -0.97
CD46-208ENST00000367042 CCDC113Q9H0I3 377 aa9□□□□□ -0.97
CD46-208ENST00000367042 LRP6O75581 1613 aa9□□□□□ -0.97
CD46-208ENST00000367042 TLDC2A0PJX2 215 aa9□□□□□ -0.97
CD46-208ENST00000367042 RAD51CO43502 376 aa9□□□□□ -0.97
CD46-208ENST00000367042 SHOX2O60902 331 aaPredicted RBP9□□□□□ -0.97
CD46-208ENST00000367042 MAP2K2P36507 400 aa9□□□□□ -0.97
CD46-208ENST00000367042 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
CD46-208ENST00000367042 CASKIN2Q8WXE0 1202 aa9□□□□□ -0.97
CD46-208ENST00000367042 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
CD46-208ENST00000367042 DDX47Q9H0S4 455 aaKnown RBP9□□□□□ -0.97
CD46-208ENST00000367042 MAGEF1Q9HAY2 307 aa9□□□□□ -0.97
CD46-208ENST00000367042 PANK4Q9NVE7 773 aa9□□□□□ -0.97
CD46-208ENST00000367042 SIK3Q9Y2K2 1263 aa9□□□□□ -0.97
CD46-208ENST00000367042 COL4A3BPQ9Y5P4 624 aa9□□□□□ -0.97
CD46-208ENST00000367042 GRIN2DO15399 1336 aa9□□□□□ -0.97
CD46-208ENST00000367042 NRAPQ86VF7 1730 aa9□□□□□ -0.97
CD46-208ENST00000367042 ZNF233A6NK53 670 aa9□□□□□ -0.97
CD46-208ENST00000367042 PPP1R37O75864 691 aa9□□□□□ -0.97
CD46-208ENST00000367042 TMOD1P28289 359 aa9□□□□□ -0.97
CD46-208ENST00000367042 FKBP3Q00688 224 aaKnown RBP9□□□□□ -0.97
CD46-208ENST00000367042 ITPK1Q13572 414 aa9□□□□□ -0.97
CD46-208ENST00000367042 FAM26FQ5R3K3 315 aa9□□□□□ -0.97
CD46-208ENST00000367042 C12orf60Q5U649 245 aa9□□□□□ -0.97
CD46-208ENST00000367042 CENPPQ6IPU0 288 aa9□□□□□ -0.97
CD46-208ENST00000367042 GIMAP7Q8NHV1 300 aa9□□□□□ -0.97
CD46-208ENST00000367042 CABS1Q96KC9 395 aa9□□□□□ -0.97
CD46-208ENST00000367042 PURBQ96QR8 312 aaKnown RBP9□□□□□ -0.97
CD46-208ENST00000367042 MYCBPQ99417 103 aaPredicted RBP9□□□□□ -0.97
CD46-208ENST00000367042 TSKSQ9UJT2 592 aa9□□□□□ -0.97
CD46-208ENST00000367042 ZNF804BA4D1E1 1349 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 FLT1P17948 1338 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 A0A087X0T9 212 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 NPHP3-ACAD11A0A0J9YXS1 232 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 F8W031 263 aaPredicted RBP8.99□□□□□ -0.97
CD46-208ENST00000367042 MPHOSPH10O00566 681 aaKnown RBP8.99□□□□□ -0.97
CD46-208ENST00000367042 MEFVO15553 781 aaPredicted RBP8.99□□□□□ -0.97
CD46-208ENST00000367042 SLC37A4O43826 429 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 FAM228BP0C875 321 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 ACTN1P12814 892 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 GRB10Q13322 594 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 KRT71Q3SY84 523 aa8.99□□□□□ -0.97
CD46-208ENST00000367042 GALNT17Q6IS24 598 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms