RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 KATNAL1Q9BW62 490 aa16.77■□□□□ 0.28
MRPL55-218ENST00000366747 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
MRPL55-218ENST00000366747 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.28
MRPL55-218ENST00000366747 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.28
MRPL55-218ENST00000366747 DEXIO95424 95 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 MYL3P08590 195 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 UBA1P22314 1058 aaKnown RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 FAAP100Q0VG06 881 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 PKN1Q16512 942 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 UBE2SQ16763 222 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 AFG1LQ8WV93 481 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 SLC26A6Q9BXS9 759 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-218ENST00000366747 TMEM39AQ9NV64 488 aa16.76■□□□□ 0.27
MRPL55-218ENST00000366747 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 GGPS1O95749 300 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 PTGS1P23219 599 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
MRPL55-218ENST00000366747 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 PHKBQ93100 1093 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 MLXIPQ9HAP2 919 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
MRPL55-218ENST00000366747 TBX21Q9UL17 535 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
MRPL55-218ENST00000366747 KIAA1217Q5T5P2 1943 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 PFKFB2O60825 505 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 CD4P01730 458 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 RAG1P15918 1043 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 SREBF1P36956 1147 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 REXO1Q8N1G1 1221 aaKnown RBP16.74■□□□□ 0.27
MRPL55-218ENST00000366747 SPATA33Q96N06 139 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
MRPL55-218ENST00000366747 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 STK36Q9NRP7 1315 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 CEP290O15078 2479 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 TRIM43BA6NCK2 446 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 SEC24BO95487 1268 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 F2P00734 622 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 NEK4P51957 841 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 AK2P54819 239 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 MTMR1Q13613 665 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 NIPA1Q7RTP0 329 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 TRIM43Q96BQ3 446 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-218ENST00000366747 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 UBE2OQ9C0C9 1292 aaKnown RBP16.73■□□□□ 0.27
MRPL55-218ENST00000366747 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
MRPL55-218ENST00000366747 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
MRPL55-218ENST00000366747 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
MRPL55-218ENST00000366747 TIMP1P01033 207 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 XBP1P17861 261 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 ITGB5P18084 799 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 PSMC6P62333 389 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-218ENST00000366747 SP2Q02086 613 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 SCRN1Q12765 414 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 SEMA3FQ13275 785 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 SH3RF1Q7Z6J0 888 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 TDHQ8IZJ6 230 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 MXRA8Q9BRK3 442 aa16.72■□□□□ 0.27
MRPL55-218ENST00000366747 CYP3A4P08684 503 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 RBM25P49756 843 aaKnown RBP16.71■□□□□ 0.27
MRPL55-218ENST00000366747 ARHGAP4P98171 946 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 STK3Q13188 491 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 HSDL1Q3SXM5 330 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 CEP55Q53EZ4 464 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 WASF1Q92558 559 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
MRPL55-218ENST00000366747 HAS3O00219 553 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 B4GALT4O60513 344 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 KCNA2P16389 499 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-218ENST00000366747 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 DAGLBQ8NCG7 672 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 CRYGNQ8WXF5 182 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 KAT2BQ92831 832 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 BADQ92934 168 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 VPS54Q9P1Q0 977 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 NFASCO94856 1347 aa16.7■□□□□ 0.26
MRPL55-218ENST00000366747 NLRP5P59047 1200 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 FPGSQ05932 587 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 PPIGQ13427 754 aaKnown RBP eCLIP16.69■□□□□ 0.266e-7■■■■□ 20.4
MRPL55-218ENST00000366747 MFSD10Q14728 455 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 LRIT3Q3SXY7 679 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 CYFIP1Q7L576 1253 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 GTF3C6Q969F1 213 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 GPR20Q99678 358 aa16.69■□□□□ 0.26
MRPL55-218ENST00000366747 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms