RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 FBXL21Q9UKT6 434 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 RWDD3Q9Y3V2 267 aa0.9□□□□□ -2.27
RNU6-54P-201ENST00000365563 TRBV23OR9-2A0A075B6M9 112 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 GRID2IPA4D2P6 1211 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 GPR182O15218 404 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 CSF2RBP32927 897 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 PTGER1P34995 402 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 STAT5AP42229 794 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 CCT4P50991 539 aaKnown RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 USP14P54578 494 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 FHL1Q13642 323 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 CNGB1Q14028 1251 aaPredicted RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZMAT1Q5H9K5 638 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 KCNV1Q6PIU1 500 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF517Q6ZMY9 492 aaPredicted RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 GPR155Q7Z3F1 870 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 FOXP4Q8IVH2 680 aaPredicted RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 GLYCTKQ8IVS8 523 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 REXO1Q8N1G1 1221 aaKnown RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 ANKRD35Q8N283 1001 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 BOLLQ8N9W6 283 aaKnown RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 SUPT20HQ8NEM7 779 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 NUDT10Q8NFP7 164 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 PROKR1Q8TCW9 393 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLC25A43Q8WUT9 341 aaPredicted RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 NUDT11Q96G61 164 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 SYT3Q9BQG1 590 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 PLA2G12BQ9BX93 195 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 C12orf65Q9H3J6 166 aaKnown RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 NELFAQ9H3P2 528 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 SYNPO2LQ9H987 977 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 KMT5AQ9NQR1 393 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 RBPJLQ9UBG7 517 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 REV1Q9UBZ9 1251 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF70Q9UC06 446 aaPredicted RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 EGFL7Q9UHF1 273 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 TTF2Q9UNY4 1162 aaKnown RBP0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 CORINQ9Y5Q5 1042 aa0.89□□□□□ -2.27
RNU6-54P-201ENST00000365563 CHURC1-FNTBB4DL54 471 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 KLHL18O94889 574 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 FBXO21O94952 628 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 NTRK1P04629 796 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 IGKV2-30P06310 120 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 RLBP1P12271 317 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 GJA4P35212 333 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 CCNFP41002 786 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 AVPR1BP47901 424 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLC6A11P48066 632 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 CLK3P49761 638 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF211Q13398 564 aaPredicted RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 RRP1BQ14684 758 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 PCOLCEQ15113 449 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 SMAD2Q15796 467 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 EEF1DP3Q658K8 133 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 AGMOQ6ZNB7 445 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 LRRC55Q6ZSA7 311 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 USP43Q70EL4 1123 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 CCDC84Q86UT8 332 aaPredicted RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 VRK3Q8IV63 474 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 GSPT2Q8IYD1 628 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 D2HGDHQ8N465 521 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 FBF1Q8TES7 1133 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 THAP3Q8WTV1 239 aaPredicted RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZBTB9Q96C00 473 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 TOE1Q96GM8 510 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF778Q96MU6 729 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 DPYSL5Q9BPU6 564 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 WACQ9BTA9 647 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 CARD11Q9BXL7 1154 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 FAM8A1Q9UBU6 413 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 PUF60Q9UHX1 559 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 MINPP1Q9UNW1 487 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 SF3B6Q9Y3B4 125 aaKnown RBP0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 SIT1Q9Y3P8 196 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 NR2E1Q9Y466 385 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 PRR36Q9H6K5 1346 aa0.88□□□□□ -2.27
RNU6-54P-201ENST00000365563 H3BRB1 525 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 NPHS1O60500 1241 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 CUTAO60888 179 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 UBOX5O94941 541 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 HTR3BO95264 441 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 ITGB1P05556 798 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 CKMP06732 381 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 SNRPB2P08579 225 aaKnown RBP0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF76P36508 570 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 MAN2A2P49641 1150 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 NHLH1Q02575 133 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 HYAL1Q12794 435 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 FOXL1Q12952 345 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 RAPGEF1Q13905 1077 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 CHRNA2Q15822 529 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 CCDC85BQ15834 202 aaPredicted RBP0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 CR1LQ2VPA4 569 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 KIAA1614Q5VZ46 1190 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 RCSD1Q6JBY9 416 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 DLK2Q6UY11 383 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 RHOUQ7L0Q8 258 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 MILR1Q7Z6M3 343 aa0.87□□□□□ -2.27
RNU6-54P-201ENST00000365563 SLITRK4Q8IW52 837 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms