RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 LCA5LO95447 670 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 FAM107AO95990 144 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 CDR1P51861 262 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 AOC3Q16853 763 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 CCDC40Q4G0X9 1142 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 USP17L1Q7RTZ2 530 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 TGFBRAP1Q8WUH2 860 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 UBAC1Q9BSL1 405 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 ROBO3Q96MS0 1386 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 NAV1Q8NEY1 1877 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 CYP2D7A0A087X1C5 515 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 MACROD2A1Z1Q3 448 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 NR1D1P20393 614 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 ELF1P32519 619 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 HDLBPQ00341 1268 aaKnown RBP21.04■□□□□ 0.96
CMTM3-201ENST00000361909 PTGDRQ13258 359 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
CMTM3-201ENST00000361909 DACT2Q5SW24 774 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 PPP4R3AQ6IN85 833 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 DHTKD1Q96HY7 919 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-201ENST00000361909 TRIM47Q96LD4 638 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 CCDC42Q96M95 316 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 ERGIC2Q96RQ1 377 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 GDF3Q9NR23 364 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 ZNF646O15015 1829 aaPredicted RBP21.03■□□□□ 0.96
CMTM3-201ENST00000361909 FAM205CA6NFA0 338 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 NF2P35240 595 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 PKN1Q16512 942 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 TEX11Q8IYF3 940 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 MTRQ99707 1265 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 FOCADQ5VW36 1801 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 BICDL2A1A5D9 508 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 NLRP14Q86W24 1093 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 EIF1ADQ8N9N8 165 aaKnown RBP21.03■□□□□ 0.96
CMTM3-201ENST00000361909 WHAMMQ8TF30 809 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 HDAC7Q8WUI4 952 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 NUP133Q8WUM0 1156 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 P3H4Q92791 437 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 SCN9AQ15858 1988 aa21.03■□□□□ 0.96
CMTM3-201ENST00000361909 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 USP17L8P0C7I0 530 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 CALM1P0DP23 149 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 CALM2P0DP24 149 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 CALM3P0DP25 149 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 MDH1P40925 334 aaKnown RBP21.02■□□□□ 0.96
CMTM3-201ENST00000361909 MYCBPAPQ8TBZ2 947 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 TEKT1Q969V4 418 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 ATP6V1G3Q96LB4 118 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 RNPC3Q96LT9 517 aaKnown RBP21.02■□□□□ 0.96
CMTM3-201ENST00000361909 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 TUBGCP2Q9BSJ2 902 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 IFIH1Q9BYX4 1025 aaKnown RBP21.02■□□□□ 0.96
CMTM3-201ENST00000361909 GDAQ9Y2T3 454 aa21.02■□□□□ 0.96
CMTM3-201ENST00000361909 PES1O00541 588 aaKnown RBP21.02■□□□□ 0.95
CMTM3-201ENST00000361909 ZNF174Q15697 407 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 CEP85LQ5SZL2 805 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 ARMC9Q7Z3E5 817 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 IQCA1Q86XH1 822 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 STAMQ92783 540 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 LRWD1Q9UFC0 647 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 TFR2Q9UP52 801 aa21.02■□□□□ 0.95
CMTM3-201ENST00000361909 PJA2O43164 708 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 RHOBTB3O94955 611 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 STAT6P42226 847 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 MRPL12P52815 198 aaKnown RBP21.01■□□□□ 0.95
CMTM3-201ENST00000361909 FUT2Q10981 343 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 EARS2Q5JPH6 523 aaKnown RBP21.01■□□□□ 0.95
CMTM3-201ENST00000361909 TTI2Q6NXR4 508 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 C6orf89Q6UWU4 347 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 ZSCAN29Q8IWY8 852 aaPredicted RBP21.01■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC13Q8IYE1 715 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 SHISA4Q96DD7 197 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 MAGEF1Q9HAY2 307 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 CD2APQ9Y5K6 639 aa21.01■□□□□ 0.95
CMTM3-201ENST00000361909 DDX60LQ5H9U9 1706 aaKnown RBP21.01■□□□□ 0.95
CMTM3-201ENST00000361909 SMIM22K7EJ46 135 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 IFFO1Q0D2I5 559 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 TBC1D8BQ0IIM8 1120 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 SEC23AQ15436 765 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 CFAP221Q4G0U5 840 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 TTC19Q6DKK2 380 aaPredicted RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 LRIG3Q6UXM1 1119 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 CCDC82Q8N4S0 544 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 GIMAP8Q8ND71 665 aaPredicted RBP21■□□□□ 0.95
CMTM3-201ENST00000361909 CCT8L2Q96SF2 557 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 MXD3Q9BW11 206 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 ZNF287Q9HBT7 754 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 AGPAT5Q9NUQ2 364 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 PLAGL2Q9UPG8 496 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 PCDHA13Q9Y5I0 950 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 CAPN6Q9Y6Q1 641 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 PSME4Q14997 1843 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 FLT1P17948 1338 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 GRID2IPA4D2P6 1211 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 B4DLN1 442 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 COBLO75128 1261 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 CYP2D6P10635 497 aa21■□□□□ 0.95
CMTM3-201ENST00000361909 FKBP15Q5T1M5 1219 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms