RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 UBAC1Q9BSL1 405 aa24.58■■□□□ 1.53
CD47-202ENST00000361309 KRT23Q9C075 422 aa24.58■■□□□ 1.53
CD47-202ENST00000361309 RWDD1Q9H446 243 aaPredicted RBP24.58■■□□□ 1.53
CD47-202ENST00000361309 RGS20O76081 388 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 GJB5O95377 273 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 IFIT1BQ5T764 474 aaKnown RBP24.57■■□□□ 1.52
CD47-202ENST00000361309 ZNF618Q5T7W0 954 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 TRAF7Q6Q0C0 670 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 RAD9AQ99638 391 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 PDCD2LQ9BRP1 358 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 MTUS1Q9ULD2 1270 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 DOCK5Q9H7D0 1870 aa24.57■■□□□ 1.52
CD47-202ENST00000361309 HIP1O00291 1037 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 PPP1R11O60927 126 aaPredicted RBP24.56■■□□□ 1.52
CD47-202ENST00000361309 GHRHRQ02643 423 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 IKBKEQ14164 716 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 HIC1Q14526 733 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 MYSM1Q5VVJ2 828 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 CNNM2Q9H8M5 875 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 SUGCTQ9HAC7 445 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 LMCD1Q9NZU5 365 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 CTNNA3Q9UI47 895 aa24.56■■□□□ 1.52
CD47-202ENST00000361309 KLRF2D3W0D1 207 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 EFCAB14O75071 495 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 HOXD8P13378 290 aaPredicted RBP24.55■■□□□ 1.52
CD47-202ENST00000361309 ERVK-21P61565 698 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 NUCB1Q02818 461 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 MBTPS1Q14703 1052 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 CELF3Q5SZQ8 465 aaKnown RBP24.55■■□□□ 1.52
CD47-202ENST00000361309 FAM117BQ6P1L5 589 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 STOX1Q6ZVD7 989 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 MTMR8Q96EF0 704 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 TGS1Q96RS0 853 aaKnown RBP24.55■■□□□ 1.52
CD47-202ENST00000361309 EPHX3Q9H6B9 360 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 PCDHA1Q9Y5I3 950 aa24.55■■□□□ 1.52
CD47-202ENST00000361309 LINC01553A4QN01 128 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 PPFIA4O75335 1185 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 GGPS1O95749 300 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 IGHDP01880 384 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 HOXA13P31271 388 aaPredicted RBP24.54■■□□□ 1.52
CD47-202ENST00000361309 AAMPQ13685 434 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 HSDL1Q3SXM5 330 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 KCNV1Q6PIU1 500 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 VSIG10LQ86VR7 867 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 IL31RAQ8NI17 732 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 SPATA33Q96N06 139 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 MAP3K20Q9NYL2 800 aaKnown RBP24.54■■□□□ 1.52
CD47-202ENST00000361309 MAD2L2Q9UI95 211 aa24.54■■□□□ 1.52
CD47-202ENST00000361309 KAT6AQ92794 2004 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 ZBTB5O15062 677 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 LGR5O75473 907 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 SP2Q02086 613 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 PGM5Q15124 567 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 SEC23AQ15436 765 aa24.53■■□□□ 1.52
CD47-202ENST00000361309 ZFP91Q96JP5 570 aaPredicted RBP24.53■■□□□ 1.52
CD47-202ENST00000361309 PLA2G5P39877 138 aa24.52■■□□□ 1.52
CD47-202ENST00000361309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.52■■□□□ 1.525e-7■■■■□ 21.8
CD47-202ENST00000361309 CYB5R4Q7L1T6 521 aa24.52■■□□□ 1.52
CD47-202ENST00000361309 SAMD3Q8N6K7 520 aa24.52■■□□□ 1.52
CD47-202ENST00000361309 NLRC5Q86WI3 1866 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 PALM3A6NDB9 673 aaPredicted RBP24.51■■□□□ 1.51
CD47-202ENST00000361309 UBA1P22314 1058 aaKnown RBP24.51■■□□□ 1.51
CD47-202ENST00000361309 THPOP40225 353 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 HOMER1Q86YM7 354 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 GPKOWQ92917 476 aaPredicted RBP eCLIP24.51■■□□□ 1.512e-6■■■□□ 15.9
CD47-202ENST00000361309 FAM122AQ96E09 287 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 C16orf70Q9BSU1 422 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 IL25Q9H293 177 aa24.51■■□□□ 1.51
CD47-202ENST00000361309 CCND2P30279 289 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 SERINC5Q86VE9 423 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 DBF4BQ8NFT6 615 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 MLXIPQ9HAP2 919 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 INSL6Q9Y581 213 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 EMSYQ7Z589 1322 aa24.5■■□□□ 1.51
CD47-202ENST00000361309 RSPH10B2B2RC85 870 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 RSPH10BP0C881 870 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 TGFB3P10600 412 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 SLC35G1Q2M3R5 365 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 FCHSD1Q86WN1 690 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 MYOCDQ8IZQ8 938 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 KHSRPQ92945 711 aaKnown RBP eCLIP24.49■■□□□ 1.512e-7■■■□□ 14.6
CD47-202ENST00000361309 ATP6V0A1Q93050 837 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 LRFN3Q9BTN0 628 aa24.49■■□□□ 1.51
CD47-202ENST00000361309 C17orf102A2RUQ5 167 aa24.48■■□□□ 1.51
CD47-202ENST00000361309 GCOM1H8Y6P7 765 aaPredicted RBP24.48■■□□□ 1.51
CD47-202ENST00000361309 AMHP03971 560 aa24.48■■□□□ 1.51
CD47-202ENST00000361309 POLR2MP0CAP2 368 aa24.48■■□□□ 1.51
CD47-202ENST00000361309 MKRN4PQ13434 485 aaPredicted RBP24.48■■□□□ 1.51
CD47-202ENST00000361309 PIGSQ96S52 555 aa24.48■■□□□ 1.51
CD47-202ENST00000361309 BCAS3Q9H6U6 928 aa24.48■■□□□ 1.51
CD47-202ENST00000361309 H3BRB1 525 aa24.47■■□□□ 1.51
CD47-202ENST00000361309 GRM4Q14833 912 aa24.47■■□□□ 1.51
CD47-202ENST00000361309 FBXO22Q8NEZ5 403 aa24.47■■□□□ 1.51
CD47-202ENST00000361309 TUT1Q9H6E5 874 aaKnown RBP24.47■■□□□ 1.51
CD47-202ENST00000361309 RIOX1Q9H6W3 641 aa24.47■■□□□ 1.51
CD47-202ENST00000361309 UBE2ZQ9H832 354 aaPredicted RBP24.47■■□□□ 1.51
CD47-202ENST00000361309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.46■■□□□ 1.51
CD47-202ENST00000361309 TREHO43280 583 aa24.46■■□□□ 1.51
CD47-202ENST00000361309 LGALS2P05162 132 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms