RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 KIAA1024Q9UPX6 916 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 CDC27P30260 824 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 LRRC23Q53EV4 343 aaPredicted RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 STOX1Q6ZVD7 989 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 CEP72Q9P209 647 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 DDX39AO00148 427 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 GYG1P46976 350 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 RBM43Q6ZSC3 357 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 NUF2Q9BZD4 464 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 ZNF185O15231 689 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 COG7P83436 770 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 HDLBPQ00341 1268 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 LRRC31Q6UY01 552 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 PPP4R1Q8TF05 950 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 LRRC1Q9BTT6 524 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 FUT8Q9BYC5 575 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 TUBE1Q9UJT0 475 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 ANAPC5Q9UJX4 755 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 CAPN11Q9UMQ6 739 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 CEP152O94986 1710 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 PXDNLA1KZ92 1463 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 LMNAP02545 664 aaKnown RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 MDH1P40925 334 aaKnown RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 TAF1DQ9H5J8 278 aaPredicted RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 NRKQ7Z2Y5 1582 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 A0A1W2PQC6 194 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 PRR16Q569H4 304 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 ECT2Q9H8V3 914 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 CFAP73A6NFT4 308 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 SNX1Q13596 522 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 NUGGCQ68CJ6 796 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 CCNI2Q6ZMN8 369 aaPredicted RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 KIFC2Q96AC6 838 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 HAUS2Q9NVX0 235 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 MAPK13O15264 365 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 GFPT2O94808 682 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 SERPINB6P35237 376 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 SLC1A4P43007 532 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 EPHA10Q5JZY3 1008 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 AZI2Q9H6S1 392 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 LIMA1Q9UHB6 759 aaKnown RBP15.16■□□□□ 0.02
SMC5-201ENST00000361138 PRR36Q9H6K5 1346 aa15.16■□□□□ 0.02
SMC5-201ENST00000361138 SPATA4Q8NEY3 305 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 IFNB1P01574 187 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 FGGP02679 453 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 TBK1Q9UHD2 729 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 ATP2A3Q93084 1043 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 ANGPTL2Q9UKU9 493 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 RIMBP2O15034 1052 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 PLEKHA8P1O95397 391 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 GSDMBQ8TAX9 411 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 CHMP6Q96FZ7 201 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 GCNT4Q9P109 453 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 FBXO2Q9UK22 296 aaPredicted RBP15.15■□□□□ 0.02
SMC5-201ENST00000361138 PPP1R37O75864 691 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
SMC5-201ENST00000361138 RAD9BQ6WBX8 426 aa15.15■□□□□ 0.02
SMC5-201ENST00000361138 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
SMC5-201ENST00000361138 UFL1O94874 794 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 ATF7P17544 494 aaPredicted RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 HNRNPH1P31943 449 aaKnown RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 LMNB2Q03252 620 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 CHRNDQ07001 517 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 SMC1BQ8NDV3 1235 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 HARSP12081 509 aaKnown RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 ZNF449Q6P9G9 518 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 TBCKQ8TEA7 893 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 SPDL1Q96EA4 605 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 CRB1P82279 1406 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 RIN2Q8WYP3 895 aaPredicted RBP15.14■□□□□ 0.01
SMC5-201ENST00000361138 YY1AP1Q9H869 796 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 THEGQ9P2T0 379 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 SNX12Q9UMY4 172 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 MROH7-TTC4A0A0A0MT08 1334 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 ADGRB3O60242 1522 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 ELF1P32519 619 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 PMS2P54278 862 aa15.14■□□□□ 0.01
SMC5-201ENST00000361138 GJA10Q969M2 543 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms