RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CHAMP1Q96JM3 812 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 TBK1Q9UHD2 729 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 ZNF804BA4D1E1 1349 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 RSBN1LQ6PCB5 846 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-202ENST00000359082 EPS15L1Q9UBC2 864 aa19.93■□□□□ 0.78
SHANK1-202ENST00000359082 MCF2LO15068 1137 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 PLTPP55058 493 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 BASP1P80723 227 aaKnown RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 MYCBPQ99417 103 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 PHKG2P15735 406 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 CCND2P30279 289 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 KCTD2Q14681 263 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 FAM186BQ8IYM0 893 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 RNF168Q8IYW5 571 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 RNF217Q8TC41 542 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 DEPDC1BQ8WUY9 529 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 GFPT2O94808 682 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 MRFAP1L1Q96HT8 127 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 INO80B-WBP1J3KQ70 363 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 GDF11O95390 407 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 DYNLL1P63167 89 aaKnown RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 INO80BQ9C086 356 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 UBE2TQ9NPD8 197 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 RGS12O14924 1447 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 ECEL1O95672 775 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 ETF1P62495 437 aaKnown RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 RASEFQ8IZ41 740 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 PDCD7Q8N8D1 485 aaKnown RBP19.92■□□□□ 0.78
SHANK1-202ENST00000359082 RETREG2Q8NC44 543 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 TRIM11Q96F44 468 aa19.92■□□□□ 0.78
SHANK1-202ENST00000359082 FTCDO95954 541 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 APBA1Q02410 837 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 USPL1Q5W0Q7 1092 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 XPOTO43592 962 aaKnown RBP19.91■□□□□ 0.78
SHANK1-202ENST00000359082 OSTNP61366 133 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 G3BP2Q9UN86 482 aaKnown RBP19.91■□□□□ 0.78
SHANK1-202ENST00000359082 CDC25BP30305 580 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 P2RX5Q93086 422 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 FGD4Q96M96 766 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 MAGEF1Q9HAY2 307 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 CARMIL3Q8ND23 1372 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 ABCC4O15439 1325 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 OSBPP22059 807 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 RNASELQ05823 741 aaKnown RBP19.91■□□□□ 0.78
SHANK1-202ENST00000359082 SPDYE1Q8NFV5 336 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-202ENST00000359082 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 AMNQ9BXJ7 453 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 PUS3Q9BZE2 481 aaKnown RBP19.91■□□□□ 0.78
SHANK1-202ENST00000359082 DAAM1Q9Y4D1 1078 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 TRPA1O75762 1119 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 SLCO1A2P46721 670 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 C7orf31Q8N865 590 aa19.91■□□□□ 0.78
SHANK1-202ENST00000359082 KIAA0232Q92628 1395 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 CDC26Q8NHZ8 85 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 GAP43P17677 238 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 TFAMQ00059 246 aaKnown RBP19.9■□□□□ 0.78
SHANK1-202ENST00000359082 TCP11X2Q5H9J9 407 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 SLC17A8Q8NDX2 589 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 PLXNC1O60486 1568 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 ZFYVE16Q7Z3T8 1539 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 PPP6R2O75170 966 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 LAD1O00515 517 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 BAG6P46379 1132 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 MORC4Q8TE76 937 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 KRT82Q9NSB4 513 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 TLR7Q9NYK1 1049 aaKnown RBP19.9■□□□□ 0.78
SHANK1-202ENST00000359082 UBN2Q6ZU65 1347 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 WDR91A4D1P6 747 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 FOSP01100 380 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-202ENST00000359082 PCCAP05165 728 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-202ENST00000359082 ATP6V0A1Q93050 837 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 STK17AQ9UEE5 414 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 MAN1B1Q9UKM7 699 aa19.9■□□□□ 0.78
SHANK1-202ENST00000359082 TTLL1O95922 423 aa19.89■□□□□ 0.78
SHANK1-202ENST00000359082 ASPRV1Q53RT3 343 aa19.89■□□□□ 0.78
SHANK1-202ENST00000359082 GCNT4Q9P109 453 aa19.89■□□□□ 0.78
SHANK1-202ENST00000359082 LRRD1A4D1F6 860 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 PDCD2Q16342 344 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 SCARA5Q6ZMJ2 495 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 NXF1Q9UBU9 619 aaKnown RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 CPSF3Q9UKF6 684 aaKnown RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 ZNF500O60304 480 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 EVI5O60447 810 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 ZNF658Q5TYW1 1059 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 ALKBH8Q96BT7 664 aaKnown RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 AP5M1Q9H0R1 490 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 PLS3P13797 630 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 CD58P19256 250 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 SH3BGRP55822 239 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-202ENST00000359082 PIGSQ96S52 555 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 CDC23Q9UJX2 597 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 SPOPLQ6IQ16 392 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 SLC12A6Q9UHW9 1150 aa19.89■□□□□ 0.77
SHANK1-202ENST00000359082 ARL4AP40617 200 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 OR6B2Q6IFH4 312 aa19.88■□□□□ 0.77
SHANK1-202ENST00000359082 CACTINQ8WUQ7 758 aaKnown RBP19.88■□□□□ 0.77
SHANK1-202ENST00000359082 ABCC12Q96J65 1359 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms