RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 E9PMD0 336 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ACTN1P12814 892 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 KLRC1P26715 233 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TMOD1P28289 359 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 IFNAR2P48551 515 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TRADDQ15628 312 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ARHGAP44Q17R89 818 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ALS2CLQ60I27 953 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MGARPQ8TDB4 240 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TBC1D31Q96DN5 1066 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MYCBPQ99417 103 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 PLCD4Q9BRC7 762 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 PACSIN1Q9BY11 444 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 CCSER1Q9C0I3 900 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 COL4A3BPQ9Y5P4 624 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ZNF263O14978 683 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 GNPATO15228 680 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 CLIC2O15247 247 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 CHMP2AO43633 222 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 GBP2P32456 591 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 BTDP43251 543 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 FKBP3Q00688 224 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 HAUS3Q68CZ6 603 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ZNF507Q8TCN5 953 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 LRRC27Q9C0I9 530 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 BARHL2Q9NY43 387 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TBCAO75347 108 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 ECM2O94769 699 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 RPSAP08865 295 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 NR2F2P24468 414 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MAP2K1Q02750 393 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 PABPC4Q13310 644 aaKnown RBP eCLIP7.22□□□□□ -1.255e-11■■■□□ 15.5
CSDE1-203ENST00000358528 NKX1-1Q15270 411 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 IFI16Q16666 785 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TPTE2Q6XPS3 522 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MAEAQ7L5Y9 396 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 AK8Q96MA6 479 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 DDX25Q9UHL0 483 aaKnown RBP7.22□□□□□ -1.25
CSDE1-203ENST00000358528 PLAGL2Q9UPG8 496 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 MYH10P35580 1976 aa7.22□□□□□ -1.25
CSDE1-203ENST00000358528 AGPSO00116 658 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 STXBP3O00186 592 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 LSP1P33241 339 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 SLCO1A2P46721 670 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 GSTO1P78417 241 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 HDLBPQ00341 1268 aaKnown RBP7.21□□□□□ -1.25
CSDE1-203ENST00000358528 SLC20A2Q08357 652 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 MKRN4PQ13434 485 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-203ENST00000358528 NPY5RQ15761 445 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 USH1GQ495M9 461 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 FAM182BQ5T319 152 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 TMED8Q6PL24 325 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-203ENST00000358528 UNC13DQ70J99 1090 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 DGKHQ86XP1 1220 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 KIAA0895Q8NCT3 520 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 CTNNBL1Q8WYA6 563 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-203ENST00000358528 RPGRQ92834 1020 aaKnown RBP7.21□□□□□ -1.25
CSDE1-203ENST00000358528 LRRC45Q96CN5 670 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 CUEDC2Q9H467 287 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 TSKSQ9UJT2 592 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 BCS1LQ9Y276 419 aa7.21□□□□□ -1.25
CSDE1-203ENST00000358528 RAD51CO43502 376 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 KCNQ2O43526 872 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 KLRC4O43908 158 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 UFL1O94874 794 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 PRPF6O94906 941 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 GCNT3O95395 438 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 PCP11498 1178 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 SSR1P43307 286 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 AARSP49588 968 aaKnown RBP eCLIP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 DHX9Q08211 1270 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 TTMPQ5BVD1 217 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 PDXDC1Q6P996 788 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 DPP8Q6V1X1 898 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 KCTD1Q719H9 257 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 MMGT1Q8N4V1 131 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ANKRD2Q9GZV1 360 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ANAPC4Q9UJX5 808 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 UTP11Q9Y3A2 253 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ARFGEF2Q9Y6D5 1785 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 SFI1A8K8P3 1242 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 ORC4O43929 436 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 SERPING1P05155 500 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 MYL1P05976 194 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 SNAP25P60880 206 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 GRM4Q14833 912 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 NLRP14Q86W24 1093 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 SYCP3Q8IZU3 236 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC26Q8TAB7 109 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 CEP95Q96GE4 821 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 CCT8L2Q96SF2 557 aa7.21□□□□□ -1.26
CSDE1-203ENST00000358528 PAIP2Q9BPZ3 127 aaKnown RBP7.21□□□□□ -1.26
CSDE1-203ENST00000358528 CD248Q9HCU0 757 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms