RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 SCARA5Q6ZMJ2 495 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 KRT14P02533 472 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 HOXC9P31274 260 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ODR4Q5SWX8 454 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ANKRD36BP1Q96IX9 119 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 MAP7D3Q8IWC1 876 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ENOX1Q8TC92 643 aaKnown RBP12.1□□□□□ -0.47
COL11A1-202ENST00000358392 BTBD18B2RXH4 712 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 RASGRP4Q8TDF6 673 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 DACH2Q96NX9 599 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 COG4Q9H9E3 785 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 SPTLC3Q9NUV7 552 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 CDC23Q9UJX2 597 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 E2F6O75461 281 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 UBE3AQ05086 875 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 CD58P19256 250 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 HADHAP40939 763 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 FLT4P35916 1363 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 WBP4O75554 376 aaKnown RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 LMNB2Q03252 620 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 SLC9A5Q14940 896 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
COL11A1-202ENST00000358392 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 SPICE1Q8N0Z3 855 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 TTC17Q96AE7 1141 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
COL11A1-202ENST00000358392 TYW5A2RUC4 315 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 PMLP29590 882 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 COL4A3BPQ9Y5P4 624 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 SPAG7O75391 227 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 NR2F2P24468 414 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 RANBP1P43487 201 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 RABGGTAQ92696 567 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 NT5C1BQ96P26 610 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 PSMC1P62191 440 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 GOLGA8MH3BSY2 632 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
COL11A1-202ENST00000358392 GYG1P46976 350 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 APBA1Q02410 837 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 CATSPER3Q86XQ3 398 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 ESRRBO95718 433 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF18P17022 549 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 IFNL3Q8IZI9 196 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 SNX19Q92543 992 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 NESP48681 1621 aa12.08□□□□□ -0.48
COL11A1-202ENST00000358392 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-202ENST00000358392 BRD1O95696 1058 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PCYT1AP49585 367 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 SKOR1P84550 965 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 FAM26FQ5R3K3 315 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 ZFYVE19Q96K21 471 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 TRIM15Q9C019 465 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 TTI1O43156 1089 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 NR1D1P20393 614 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 SCRN1Q12765 414 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 BBS9Q3SYG4 887 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MFSD14BQ5SR56 506 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 DSCC1Q9BVC3 393 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 ING2Q9H160 280 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 GCNT4Q9P109 453 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 HSPA4LO95757 839 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 SCG2P13521 617 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
COL11A1-202ENST00000358392 CHURC1Q8WUH1 139 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms