RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ECT2Q9H8V3 914 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 MYH10P35580 1976 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 GNAT1P11488 350 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 RANBP1P43487 201 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 ERVK-9P63128 1117 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 SPTY2D1Q68D10 685 aaPredicted RBP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 TBC1D5Q92609 795 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 DDX17Q92841 729 aaKnown RBP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 RNF14Q9UBS8 474 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 RGS16O15492 202 aaPredicted RBP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 LRRC34Q8IZ02 419 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.4
CNOT3-202ENST00000358389 AMACRQ9UHK6 382 aa12.52□□□□□ -0.4
CNOT3-202ENST00000358389 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
CNOT3-202ENST00000358389 ZNF76P36508 570 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 KSR1Q8IVT5 923 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 CD302Q8IX05 232 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 FBF1Q8TES7 1133 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 TNKSO95271 1327 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 ORC4O43929 436 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
CNOT3-202ENST00000358389 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
CNOT3-202ENST00000358389 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 IFT74Q96LB3 600 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 NDST4Q9H3R1 872 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 MLXIPLQ9NP71 852 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
CNOT3-202ENST00000358389 EPHB6O15197 1021 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 DRD4P21917 467 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 TRAF1Q13077 416 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 LRRC14Q15048 493 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 C11orf91Q3C1V1 193 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 HOOK3Q86VS8 718 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 KCNK9Q9NPC2 374 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 A8MUI8 341 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 UBOX5O94941 541 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 FCER1AP12319 257 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 CCNE1P24864 410 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 LRIG3Q6UXM1 1119 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 ANKRD42Q8N9B4 389 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 PURBQ96QR8 312 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 ABCF3Q9NUQ8 709 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 H0Y3Z8 333 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 KLRC1P26715 233 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 SFMBT2Q5VUG0 894 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 STRBPQ96SI9 672 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
CNOT3-202ENST00000358389 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
CNOT3-202ENST00000358389 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 SESN3P58005 492 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 POLR2FP61218 127 aaKnown RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 C3orf20Q8ND61 904 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ESR2Q92731 530 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 TRIM4Q9C037 500 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 DISC1Q9NRI5 854 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 H7C1W4 665 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 FLT3P36888 993 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 PHKA1P46020 1223 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 CUL1Q13616 776 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 HLFQ16534 295 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 ISCUQ9H1K1 167 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
CNOT3-202ENST00000358389 MST1RQ04912 1400 aa12.5□□□□□ -0.41
CNOT3-202ENST00000358389 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms