RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 NEMP1O14524 444 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 CREB3O43889 395 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 MCF2P10911 925 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 NESP48681 1621 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 DRP2Q13474 957 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 LRRC41Q15345 812 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 RBBP7Q16576 425 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 MYRIPQ8NFW9 859 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 RNF139Q8WU17 664 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
FXR1-202ENST00000357559 ZNF577Q9BSK1 485 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 TRPV6Q9H1D0 765 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 SCINQ9Y6U3 715 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 TMEM247A6NEH6 219 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 PFKFB1P16118 471 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
FXR1-202ENST00000357559 GOLGA8MH3BSY2 632 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 SLC8A1P32418 973 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 USP17L12C9JPN9 530 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 USP17L21D6R901 530 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 KRT14P02533 472 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 RNF219Q5W0B1 726 aaPredicted RBP11.4□□□□□ -0.58
FXR1-202ENST00000357559 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
FXR1-202ENST00000357559 METTL22Q9BUU2 404 aaPredicted RBP11.4□□□□□ -0.58
FXR1-202ENST00000357559 PPP2R2CQ9Y2T4 447 aa11.4□□□□□ -0.58
FXR1-202ENST00000357559 M0R2C6 588 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 SYMPKQ92797 1274 aaKnown RBP11.4□□□□□ -0.59
FXR1-202ENST00000357559 USP28Q96RU2 1077 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 NPATQ14207 1427 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 ALDH1B1P30837 517 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 RFX8Q6ZV50 586 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 CCDC197Q8NCU1 140 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 TEKT4Q8WW24 435 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 EPB41L5Q9HCM4 733 aa11.4□□□□□ -0.59
FXR1-202ENST00000357559 MRPL11Q9Y3B7 192 aaKnown RBP11.4□□□□□ -0.59
FXR1-202ENST00000357559 NSD2O96028 1365 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 WDR64B1ANS9 1081 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■□□ 19.1
FXR1-202ENST00000357559 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 RALGAPBQ86X10 1494 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 MYO1FO00160 1098 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 SERPINI2O75830 405 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 KLC3Q6P597 504 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 LPIN2Q92539 896 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 CNOT6LQ96LI5 555 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
FXR1-202ENST00000357559 KMT5AQ9NQR1 393 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 BCAMP50895 628 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 MRPS25P82663 173 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 PTK2BQ14289 1009 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 RRAGDQ9NQL2 400 aaPredicted RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 CFAP69A5D8W1 941 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 SPATS2Q86XZ4 545 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 UBE2TQ9NPD8 197 aaPredicted RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 GFPT2O94808 682 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 ELF1P32519 619 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 PSMD2Q13200 908 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 TAF11Q15544 211 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 MAP7D3Q8IWC1 876 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 LBRQ14739 615 aaKnown RBP11.39□□□□□ -0.59
FXR1-202ENST00000357559 ZNF790Q6PG37 636 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 SIX6OS1Q8N1H7 587 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 ARHGAP45Q92619 1136 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 EFHD1Q9BUP0 239 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 DCTPP1Q9H773 170 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
FXR1-202ENST00000357559 MYL3P08590 195 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 MFAP3P55082 362 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 SKOR1P84550 965 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 GRAMD4Q6IC98 578 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 RASGRP4Q8TDF6 673 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 AP1M1Q9BXS5 423 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 TRIM55Q9BYV6 548 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 DNAJC6O75061 913 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 GSPT1P15170 499 aaKnown RBP11.38□□□□□ -0.59
FXR1-202ENST00000357559 TESK2Q96S53 571 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 GTSE1Q9NYZ3 720 aa11.38□□□□□ -0.59
FXR1-202ENST00000357559 TEX2Q8IWB9 1127 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms