RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 MYMKA6NI61 221 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 DDX39AO00148 427 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 LRRC63Q05C16 580 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 DOK7Q18PE1 504 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 TTI2Q6NXR4 508 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 TPH2Q8IWU9 490 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 RIC8AQ9NPQ8 531 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L22D6RA61 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L17D6RBQ6 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L19D6RCP7 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 CALUO43852 315 aaPredicted RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 KRT14P02533 472 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 TNFAIP3P21580 790 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 GJC1P36383 396 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 MAGEA9P43362 315 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 IFT88Q13099 833 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 IL17AQ16552 155 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 USP17L6PQ6QN14 398 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 STXBP4Q6ZWJ1 553 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 DMGDHQ9UI17 866 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 KDM3AQ9Y4C1 1321 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 KDM3BQ7LBC6 1761 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 POTEB3A0JP26 581 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 FAM196BA6NMK8 535 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 POTECB2RU33 542 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 GNA14O95837 355 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 CFBP00751 764 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 SERPING1P05155 500 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 H2AFZP0C0S5 128 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 PLA2G4BP0C869 781 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 COASYQ13057 564 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 EMBQ6PCB8 327 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 POTEBQ6S5H4 581 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 GBP6Q6ZN66 633 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 H2AFVQ71UI9 128 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 EFCAB13Q8IY85 973 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 SPATA20Q8TB22 786 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 TAOK3Q9H2K8 898 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 GOLPH3Q9H4A6 298 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 SH2D4AQ9H788 454 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 RBM12Q9NTZ6 932 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 TMOD2Q9NZR1 351 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 RAB21Q9UL25 225 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 FAM169AQ9Y6X4 670 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 COL5A2P05997 1499 aaPredicted RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 NPHP3-ACAD11A0A0J9YXS1 232 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 SFI1A8K8P3 1242 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 MAP2K7O14733 419 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 PRPF6O94906 941 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 CCDC172P0C7W6 258 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 NR1D1P20393 614 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 TMED8Q6PL24 325 aaPredicted RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 HDAC7Q8WUI4 952 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 RAD54LQ92698 747 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 RBM17Q96I25 401 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 MTRQ99707 1265 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 PSD3Q9NYI0 1048 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 MAD2L2Q9UI95 211 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 FRMD4BQ9Y2L6 1034 aa7.5□□□□□ -1.21
RTN4-203ENST00000357376 AFDNP55196 1824 aaKnown RBP7.5□□□□□ -1.21
RTN4-203ENST00000357376 VIMP08670 466 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 NEFHP12036 1026 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 STAT3P40763 770 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 STAT1P42224 750 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 TBC1D10BQ4KMP7 808 aaPredicted RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 LRRC31Q6UY01 552 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 RUFY4Q6ZNE9 571 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 FBXO33Q7Z6M2 555 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 RASAL2Q9UJF2 1139 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 HDAC9Q9UKV0 1011 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 MRC1P22897 1456 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 SLIT3O75094 1523 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 A0A087WUV0 522 aaPredicted RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 TARSL2A2RTX5 802 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 EXOC3O60645 756 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 GFPT2O94808 682 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 RASA1P20936 1047 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 UBXN2AP68543 259 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 NFIXQ14938 502 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 ASPRV1Q53RT3 343 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 WDR93Q6P2C0 686 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 TADA2BQ86TJ2 420 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 KIAA0825Q8IV33 1275 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 SPICE1Q8N0Z3 855 aa7.49□□□□□ -1.21
RTN4-203ENST00000357376 GUF1Q8N442 669 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 MARCH10Q8NA82 808 aaPredicted RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 PAIP2Q9BPZ3 127 aaKnown RBP7.49□□□□□ -1.21
RTN4-203ENST00000357376 KBTBD4Q9NVX7 518 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms