RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PTK2Q05397 1052 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZNF653Q96CK0 615 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 MTA3Q9BTC8 594 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 LY9Q9HBG7 655 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 GCNT4Q9P109 453 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 CYP4F22Q6NT55 531 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 CDAN1Q8IWY9 1227 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 COA7Q96BR5 231 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZMYND12Q9H0C1 365 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 CERKLQ49MI3 558 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 AP1ARQ63HQ0 302 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 NT5C1BQ96P26 610 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 NEDD4P46934 1319 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 hCG_1984214I3L0E3 225 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 MFAP3P55082 362 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 BPIFB4P59827 614 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 DR1Q01658 176 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 ZNF713Q8N859 430 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 N4BP2L2Q92802 583 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 PALMO75781 387 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 ICA1Q05084 483 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 TEKT3Q9BXF9 490 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 SPATS2LQ9NUQ6 558 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 MRPL11Q9Y3B7 192 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 RCAN1P53805 252 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 C6orf118Q5T5N4 469 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 KAZNQ674X7 775 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 ZBED4O75132 1171 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 MAP7Q14244 749 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 DEPTORQ8TB45 409 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 PPP4R1Q8TF05 950 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-202ENST00000357207 OPHN1O60890 802 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 SH3BGRP55822 239 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 TBC1D1Q86TI0 1168 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 AFAP1L2Q8N4X5 818 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 OSBPL9Q96SU4 736 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 TRPC6Q9Y210 931 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 MAPK4P31152 587 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 LIG4P49917 911 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 SIK1P57059 783 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 YWHAEP62258 255 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 SNX1Q13596 522 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 ANAPC5Q9UJX4 755 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 NLRP1Q9C000 1473 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 FGGP02679 453 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 SRLQ86TD4 932 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 ELAC2Q9BQ52 826 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 IL25Q9H293 177 aa16.94■□□□□ 0.3
TRAPPC11-202ENST00000357207 ALX1Q15699 326 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 CLGNO14967 610 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 POLR2BP30876 1174 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 ADCY2Q08462 1091 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 NUGGCQ68CJ6 796 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 NYAP1Q6ZVC0 841 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 TAB3Q8N5C8 712 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 TOM1O60784 492 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 GABPB2Q8TAK5 448 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 DYNLL2Q96FJ2 89 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 TBK1Q9UHD2 729 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 SMIM24O75264 130 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
TRAPPC11-202ENST00000357207 A0A1W2PQC6 194 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 ESYT3A0FGR9 886 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 ERVV-1B6SEH8 477 aa16.92■□□□□ 0.3
TRAPPC11-202ENST00000357207 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms