RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MYH14Q7Z406 1995 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 KRT10P13645 584 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MTMR7Q9Y216 660 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 EXOC3O60645 756 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 SERPING1P05155 500 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 STX1BP61266 288 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 FGD4Q96M96 766 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 ARL2BPQ9Y2Y0 163 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MAD1L1Q9Y6D9 718 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 STAM2O75886 525 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 APOA4P06727 396 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MCF2P10911 925 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TRIM72Q6ZMU5 477 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 NLRP3Q96P20 1036 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 NEO1Q92859 1461 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 EIF3HO15372 352 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■■■■■ 27.4
VPS13B-202ENST00000357162 ZNF658Q5TYW1 1059 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 YTHDF3Q7Z739 585 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 CRLF3Q8IUI8 442 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 POTEFA5A3E0 1075 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 C16orf96A6NNT2 1141 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 POTEIP0CG38 1075 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MYBL1P10243 752 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 IBSPP21815 317 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 POTEEQ6S8J3 1075 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TRMT10CQ7L0Y3 403 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.1□□□□□ -1.279e-7■■■■■ 70.6
VPS13B-202ENST00000357162 TNRQ92752 1358 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 GEN1Q17RS7 908 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 OR9Q1Q8NGQ5 310 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 KCNB1Q14721 858 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 PRUNE1Q86TP1 453 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 LINC00301Q8NCQ3 95 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 ROPN1BQ9BZX4 212 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 ROPN1Q9HAT0 212 aaPredicted RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 MBD5Q9P267 1494 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 AGTP01019 485 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 PPP2R2AP63151 447 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 TRADDQ15628 312 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 ZC3H18Q86VM9 953 aaKnown RBP7.1□□□□□ -1.27
VPS13B-202ENST00000357162 DDI1Q8WTU0 396 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 LPIN2Q92539 896 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 PITPNM3Q9BZ71 974 aa7.1□□□□□ -1.27
VPS13B-202ENST00000357162 CDH16O75309 829 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 IP6K1Q92551 441 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 TMEM51Q9NW97 253 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MYH1P12882 1939 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MYH4Q9Y623 1939 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 IDI1Q13907 227 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 EIF4A2Q14240 407 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 SMIM23A6NLE4 172 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 NFKBIAP25963 317 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 CHRNA3P32297 505 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ARL4CP56559 192 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 AGBL2Q5U5Z8 902 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 UBN1Q9NPG3 1134 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 KCND1Q9NSA2 647 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MCF2LO15068 1137 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 OTUD6AQ7L8S5 288 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 DIABLOQ9NR28 239 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 SPHKAPQ2M3C7 1700 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 AASDHQ4L235 1098 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 HIBCHQ6NVY1 386 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 FAM207AQ9NSI2 230 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 BIN2Q9UBW5 565 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ABCA9Q8IUA7 1624 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 GPC4O75487 556 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 IFNAR1P17181 557 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 XAB2Q9HCS7 855 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 KCND2Q9NZV8 630 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 STRIP2Q9ULQ0 834 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 UGGT1Q9NYU2 1555 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 KCNK3O14649 394 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 EEF1DP29692 281 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 MFAP3P55082 362 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 SPDYCQ5MJ68 293 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 TMC4Q7Z404 712 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 INTUQ9ULD6 942 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 INTS1Q8N201 2190 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ZNF233A6NK53 670 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 LDHBP07195 334 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ELF1P32519 619 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 HSPA2P54652 639 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 SESTD1Q86VW0 696 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 PLA2G4DQ86XP0 818 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 WDR75Q8IWA0 830 aaKnown RBP7.09□□□□□ -1.27
VPS13B-202ENST00000357162 TRAIPQ9BWF2 469 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 EPC1Q9H2F5 836 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 PXDNLA1KZ92 1463 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 ATP10BO94823 1461 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 EXOC1LA0A1B0GW35 172 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 CCDC78A2IDD5 438 aa7.09□□□□□ -1.27
VPS13B-202ENST00000357162 KIAA0391O15091 583 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms