RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 KLHL29Q96CT2 875 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 TMEM237Q96Q45 408 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 SYT15Q9BQS2 421 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 TMEM109Q9BVC6 243 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
CCR9-201ENST00000355983 PDP2Q9P2J9 529 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 SSU72P8A0A1W2PR75 194 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 ATP2C2O75185 946 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 NUDT17P0C025 328 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 CCDC166P0CW27 439 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 PPP1R2P41236 205 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 SSRP1Q08945 709 aaKnown RBP8.43□□□□□ -1.06
CCR9-201ENST00000355983 WASHC2DQ5SRD0 308 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 APOA5Q6Q788 366 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 KLHDC4Q8TBB5 520 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 STK32AQ8WU08 396 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 PTPRN2Q92932 1015 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 FGD4Q96M96 766 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 IWS1Q96ST2 819 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 TRIM7Q9C029 511 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 FAM114A2Q9NRY5 505 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
CCR9-201ENST00000355983 MYH1P12882 1939 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 ATP8B3O60423 1300 aa8.43□□□□□ -1.06
CCR9-201ENST00000355983 SIPA1L3O60292 1781 aaPredicted RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 BTNL10A8MVZ5 291 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 UBOX5O94941 541 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MOCS3O95396 460 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 YY1P25490 414 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MATR3P43243 847 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCR9-201ENST00000355983 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 SPDYAQ5MJ70 313 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 SH2D4BQ5SQS7 431 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 DDX46Q7L014 1031 aaKnown RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 FAM114A1Q8IWE2 563 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 ADSSL1Q8N142 457 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 USP38Q8NB14 1042 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 STKLD1Q8NE28 680 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 ATP8B4Q8TF62 1192 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 IRGQQ8WZA9 623 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 AIFM3Q96NN9 605 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MTA3Q9BTC8 594 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 TXLNGYQ9BZA5 131 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 RXFP1Q9HBX9 757 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 SCOCQ9UIL1 159 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 ABCB11O95342 1321 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 A0A087X0B3 334 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 F8VZ95 297 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 CCDC188H7C350 402 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 CYP27B1O15528 508 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 RAD51CO43502 376 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 SUN1O94901 812 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MMEP08473 750 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 KRT16P08779 473 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 DESP17661 470 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 LIFRP42702 1097 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 TFCP2Q12800 502 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 TMEM154Q6P9G4 183 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 COL23A1Q86Y22 540 aaPredicted RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 MYLK4Q86YV6 388 aaPredicted RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 DIS3L2Q8IYB7 885 aaKnown RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 AGGF1Q8N302 714 aaeCLIP8.42□□□□□ -1.06
CCR9-201ENST00000355983 SCFD2Q8WU76 684 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 LZTS2Q9BRK4 669 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 STMN4Q9H169 189 aaPredicted RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 LUC7LQ9NQ29 371 aaKnown RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 CYP39A1Q9NYL5 469 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MAGEC2Q9UBF1 373 aaPredicted RBP8.42□□□□□ -1.06
CCR9-201ENST00000355983 TFR2Q9UP52 801 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 WDR37Q9Y2I8 494 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 LRCH1Q9Y2L9 728 aa8.42□□□□□ -1.06
CCR9-201ENST00000355983 MYH2Q9UKX2 1941 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 FOXP2O15409 715 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 RANBP6O60518 1105 aaKnown RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 AGTP01019 485 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 TPBGLP0DKB5 382 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 TRIM21P19474 475 aaKnown RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 EIF2S2P20042 333 aaKnown RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 KIF11P52732 1056 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 ERVK-9P63128 1117 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 GSTA3Q16772 222 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 ASTE1Q2TB18 679 aaPredicted RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 MEI1Q5TIA1 1274 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 TMC3Q7Z5M5 1100 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 LRRC34Q8IZ02 419 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 TBC1D16Q8TBP0 767 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 ACTRT1Q8TDG2 376 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
CCR9-201ENST00000355983 HAPLN3Q96S86 360 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 KRT12Q99456 494 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 SLITRK6Q9H5Y7 841 aa8.41□□□□□ -1.06
CCR9-201ENST00000355983 MLXIPQ9HAP2 919 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms