RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PLEKHG1Q9ULL1 1385 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 INHBAP08476 426 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 GUCY2DQ02846 1103 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.73
COL18A1-202ENST00000355480 POC1B-GALNT4F8VUJ3 575 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 EEF1GP26641 437 aaKnown RBP19.58■□□□□ 0.73
COL18A1-202ENST00000355480 MAGOHBQ96A72 148 aaKnown RBP19.58■□□□□ 0.73
COL18A1-202ENST00000355480 ATG3Q9NT62 314 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 BAG5Q9UL15 447 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 ACTN1P12814 892 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 ETF1P62495 437 aaKnown RBP19.58■□□□□ 0.73
COL18A1-202ENST00000355480 GBP7Q8N8V2 638 aaPredicted RBP19.58■□□□□ 0.73
COL18A1-202ENST00000355480 PARD3BQ8TEW8 1205 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 HINFPQ9BQA5 517 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 ANGPTL3Q9Y5C1 460 aa19.58■□□□□ 0.73
COL18A1-202ENST00000355480 SLC4A1P02730 911 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 PSAPP07602 524 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 NPR1P16066 1061 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 CLNS1AP54105 237 aaKnown RBP19.58■□□□□ 0.72
COL18A1-202ENST00000355480 GRAPQ13588 217 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 UBE2SQ16763 222 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 GRAPLQ8TC17 118 aaPredicted RBP19.58■□□□□ 0.72
COL18A1-202ENST00000355480 CPSF3Q9UKF6 684 aaKnown RBP19.58■□□□□ 0.72
COL18A1-202ENST00000355480 CHMP6Q96FZ7 201 aa19.58■□□□□ 0.72
COL18A1-202ENST00000355480 EIF3CLB5ME19 914 aaKnown RBP19.57■□□□□ 0.72
COL18A1-202ENST00000355480 CDC37Q16543 378 aaPredicted RBP19.57■□□□□ 0.72
COL18A1-202ENST00000355480 EIF3CQ99613 913 aaKnown RBP19.57■□□□□ 0.72
COL18A1-202ENST00000355480 RRAGDQ9NQL2 400 aaPredicted RBP19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MECOMQ03112 1051 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 POLR3EQ9NVU0 708 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MMP1P03956 469 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MYLK4Q86YV6 388 aaPredicted RBP19.57■□□□□ 0.72
COL18A1-202ENST00000355480 FAM114A2Q9NRY5 505 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 CYP2D7A0A087X1C5 515 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 ABCD1P33897 745 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 FAM81BQ96LP2 452 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 LRRC4Q9HBW1 653 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 VCX3AQ9NNX9 186 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MED7O43513 233 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 GPC4O75487 556 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MYO1EQ12965 1108 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 MAN2A1Q16706 1144 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 FAM160B2Q86V87 743 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 SLC10A4Q96EP9 437 aa19.57■□□□□ 0.72
COL18A1-202ENST00000355480 ZNF233A6NK53 670 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 EFCAB8A8MWE9 144 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 FKBP3Q00688 224 aaKnown RBP19.56■□□□□ 0.72
COL18A1-202ENST00000355480 NR5A1Q13285 461 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 DBN1Q16643 649 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 MMEL1Q495T6 779 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 ZNF658Q5TYW1 1059 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-202ENST00000355480 PDXDC2PQ6P474 469 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 RTKN2Q8IZC4 609 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 LRRC8CQ8TDW0 803 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 NLRP1Q9C000 1473 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-202ENST00000355480 RFC1P35251 1148 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-202ENST00000355480 ARL4AP40617 200 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 NCAPGQ9BPX3 1015 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 TMCO4Q5TGY1 634 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 OSBP2Q969R2 916 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 UBN2Q6ZU65 1347 aa19.56■□□□□ 0.72
COL18A1-202ENST00000355480 EIF2AK2P19525 551 aaKnown RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 ASPHQ12797 758 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 TMTC4Q5T4D3 741 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 GRAMD1CQ8IYS0 662 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 GPR101Q96P66 508 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 EFCAB6Q5THR3 1501 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 KRT1P04264 644 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 IRX4P78413 519 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 GABPB1Q06547 395 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 DNAJC24Q6P3W2 148 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 RAB44Q7Z6P3 723 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 TTLL6Q8N841 843 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 GPT2Q8TD30 523 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 PARVGQ9HBI0 331 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 MAGED2Q9UNF1 606 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 ARHGEF37A1IGU5 675 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 HOXA13P31271 388 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 DDIT3P35638 169 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 KIF23Q02241 960 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 SNX1Q13596 522 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 DNAAF3Q8N9W5 541 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 PIGBQ92521 554 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 ATP6V1E2Q96A05 226 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-202ENST00000355480 ATP8B3O60423 1300 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 CDC25AP30304 524 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 SEPT12Q8IYM1 358 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 GCNT4Q9P109 453 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 CD58P19256 250 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 DYNLT1P63172 113 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 PHLDB3Q6NSJ2 640 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 SIX6OS1Q8N1H7 587 aa19.55■□□□□ 0.72
COL18A1-202ENST00000355480 ENC1O14682 589 aa19.54■□□□□ 0.72
COL18A1-202ENST00000355480 MCF2LO15068 1137 aa19.54■□□□□ 0.72
COL18A1-202ENST00000355480 BAG2O95816 211 aa19.54■□□□□ 0.72
COL18A1-202ENST00000355480 MARK3P27448 753 aa19.54■□□□□ 0.72
COL18A1-202ENST00000355480 OR6B2Q6IFH4 312 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms