RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PFKFB1P16118 471 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZC3H15Q8WU90 426 aaKnown RBP6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 SCOCQ9UIL1 159 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 KIAA1024Q9UPX6 916 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF18P17022 549 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 PPP1R2P3Q6NXS1 205 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 PDXDC1Q6P996 788 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 DSCC1Q9BVC3 393 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZMYM6O95789 1325 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 WDR17Q8IZU2 1322 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ECEL1O95672 775 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 DRP2Q13474 957 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ADALQ6DHV7 355 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 DNAJC24Q6P3W2 148 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 CRLF3Q8IUI8 442 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF577Q9BSK1 485 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 CCDC85BQ15834 202 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ATP8A1Q9Y2Q0 1164 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 GOLGA8SH3BPF8 625 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 CTSWP56202 376 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ARL13BQ3SXY8 428 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 KRT27Q7Z3Y8 459 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZSCAN32Q9NX65 697 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 MAFGO15525 162 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 EXT2Q93063 718 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 HINFPQ9BQA5 517 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ING2Q9H160 280 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 EPAS1Q99814 870 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 ZNF215Q9UL58 517 aaPredicted RBP6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 PCDHA1Q9Y5I3 950 aa6.25□□□□□ -1.41
SRGAP1-201ENST00000355086 VGLL3A8MV65 326 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KCTD2Q14681 263 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 RPAINQ86UA6 219 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ARHGEF1Q92888 912 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 NACC1Q96RE7 527 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 HPCAL4Q9UM19 191 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TIAM1Q13009 1591 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 HSPD1P10809 573 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 PSMC2P35998 433 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 LRRN2O75325 713 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SKIP12755 728 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 GRAMD1BQ3KR37 738 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SDR42E1Q8WUS8 393 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SPATS2LQ9NUQ6 558 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DAAM1Q9Y4D1 1078 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 CIITAP33076 1130 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DAB2P98082 770 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 LRRC37BQ96QE4 947 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TBK1Q9UHD2 729 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ANP32DO95626 131 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 FOSP01100 380 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 E2F5Q15329 346 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 FAM26FQ5R3K3 315 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KLRF2D3W0D1 207 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SCG2P13521 617 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 RPS8P62241 208 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DOK7Q18PE1 504 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 GTPBP6O43824 516 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 RECQLP46063 649 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ZBTB33Q86T24 672 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 RBM6P78332 1123 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 MYO1EQ12965 1108 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ABCB5Q2M3G0 1257 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TEKT4Q8WW24 435 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 INPP5FQ9Y2H2 1132 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KRT1P04264 644 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 PLS3P13797 630 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TCP11Q8WWU5 503 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 NXF1Q9UBU9 619 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SOS2Q07890 1332 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 BAG6P46379 1132 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 PATL1Q86TB9 770 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ADD3Q9UEY8 706 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DENND4BO75064 1496 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SNX2O60749 519 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 GSDMAQ96QA5 445 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 PDE11AQ9HCR9 933 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KCNA1Q09470 495 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIM60Q495X7 471 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 PPP2R2CQ9Y2T4 447 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 MYCP01106 439 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KCNA4P22459 653 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SLMAPQ14BN4 828 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 KCTD16Q68DU8 428 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DSTYKQ6XUX3 929 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 BZW1Q7L1Q6 419 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIM55Q9BYV6 548 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SLC52A2Q9HAB3 445 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 CHCHD3Q9NX63 227 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 STK17AQ9UEE5 414 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 SGSM2O43147 1006 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 AFPP02771 609 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TAC1P20366 129 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 BTDP43251 543 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 DEUP1Q05D60 604 aa6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 TRIM45Q9H8W5 580 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-201ENST00000355086 ARHGEF9O43307 516 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms