RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 KRT14P02533 472 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 TUBGCP3Q96CW5 907 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 RNF216Q9NWF9 866 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
HTT-201ENST00000355072 CLCN6P51797 869 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 SNX1Q13596 522 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 PPP1R14BQ96C90 147 aa8.66□□□□□ -1.02
HTT-201ENST00000355072 DR1Q01658 176 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 CALCRLQ16602 461 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 FBXL13Q8NEE6 735 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 SLITRK6Q9H5Y7 841 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 FAM25AB3EWG3 89 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 FAM25CB3EWG5 89 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 FAM25GB3EWG6 89 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 GFPT2O94808 682 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 MYL6BP14649 208 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 DACT3Q96B18 629 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 MRPL44Q9H9J2 332 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 SERPINB1P30740 379 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 MRPS15P82914 257 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 CSTF3Q12996 717 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 UBA2Q9UBT2 640 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 EFHBQ8N7U6 833 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 UBN1Q9NPG3 1134 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 MRFAP1Q9Y605 127 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 GPC4O75487 556 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 KANSL1LA0AUZ9 987 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 POTEFA5A3E0 1075 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 POTEIP0CG38 1075 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 POTEEQ6S8J3 1075 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 ZNF579Q8NAF0 562 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 SLC12A5Q9H2X9 1139 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 MAP3K2Q9Y2U5 619 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 KARSQ15046 597 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 GPATCH8Q9UKJ3 1502 aaKnown RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 PXDNLA1KZ92 1463 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 TAC1P20366 129 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 IBSPP21815 317 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 DCAF17Q5H9S7 520 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 TRIM69Q86WT6 500 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 ZMYND8Q9ULU4 1186 aaPredicted RBP8.65□□□□□ -1.02
HTT-201ENST00000355072 GMEB1Q9Y692 573 aa8.65□□□□□ -1.02
HTT-201ENST00000355072 PIK3R2O00459 728 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 LAMB3Q13751 1172 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 PARP10Q53GL7 1025 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 CHMP6Q96FZ7 201 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 RNF26Q9BY78 433 aaPredicted RBP8.65□□□□□ -1.03
HTT-201ENST00000355072 GGA2Q9UJY4 613 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 MSH2P43246 934 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 KRT6CP48668 564 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 POLE2P56282 527 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 FKBP3Q00688 224 aaKnown RBP8.65□□□□□ -1.03
HTT-201ENST00000355072 LDHAL6AQ6ZMR3 332 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 BSDC1Q9NW68 430 aaPredicted RBP8.65□□□□□ -1.03
HTT-201ENST00000355072 PCDH11XQ9BZA7 1347 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 PCDH11YQ9BZA8 1340 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 PNMA8CA0A1B0GUJ8 204 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 H2AFZP0C0S5 128 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 KSR2Q6VAB6 950 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 H2AFVQ71UI9 128 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 MTERF3Q96E29 417 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 NHEJ1Q9H9Q4 299 aaPredicted RBP8.65□□□□□ -1.03
HTT-201ENST00000355072 C8orf4Q9NR00 106 aa8.65□□□□□ -1.03
HTT-201ENST00000355072 CHD2O14647 1828 aaKnown RBP8.65□□□□□ -1.03
HTT-201ENST00000355072 KRT87PA6NCN2 255 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TOMM70O94826 608 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 STX3Q13277 289 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 ATP6V1G3Q96LB4 118 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 CNBD2Q96M20 576 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 PPP4R4Q6NUP7 873 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 WWP1Q9H0M0 922 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 CCDC134Q9H6E4 229 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 HNRNPCL2B2RXH8 293 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 GSTA1P08263 222 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 GNGT2O14610 69 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 CYP2C19P33261 490 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 ZBED6P86452 979 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 ZBTB41Q5SVQ8 909 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 WDR60Q8WVS4 1066 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TAF1DQ9H5J8 278 aaPredicted RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 CHMP2BQ9UQN3 213 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 GMNCA6NCL1 334 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 MAP4P27816 1152 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 PASD1Q8IV76 773 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 BRD8Q9H0E9 1235 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 LIMA1Q9UHB6 759 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 ZNF644Q9H582 1327 aaPredicted RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 ESCO1Q5FWF5 840 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms