RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 OR8K1Q8NGG5 319 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 MACROD2A1Z1Q3 448 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 SMCO2A6NFE2 343 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 H7C1D1 291 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 RAD21O60216 631 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 ATP1A1P05023 1023 aaKnown RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 TXKP42681 527 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 RANBP1P43487 201 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 NBPF9Q3BBW0 867 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 ARL6IP4Q66PJ3 421 aaKnown RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 CCDC70Q6NSX1 233 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 DYMQ7RTS9 669 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 NSMCE1Q8WV22 266 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 SLC39A2Q9NP94 309 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 REXO2Q9Y3B8 237 aaKnown RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 FRMPD2Q68DX3 1309 aaPredicted RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 STK4Q13043 487 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 GRM4Q14833 912 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 PPP1R7Q15435 360 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 SPTY2D1Q68D10 685 aaPredicted RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 HIBCHQ6NVY1 386 aaPredicted RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 MAATS1Q7Z4T9 603 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 DGKHQ86XP1 1220 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 ZNF473Q8WTR7 871 aaKnown RBP10.34□□□□□ -0.75
SMG6-202ENST00000354901 IFT81Q8WYA0 676 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 TUBGCP2Q9BSJ2 902 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 EXOC1Q9NV70 894 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 TMEM260Q9NX78 707 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 L3MBTL1Q9Y468 752 aa10.34□□□□□ -0.75
SMG6-202ENST00000354901 LRRC10BA6NIK2 292 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 F8W031 263 aaPredicted RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 STXBP3O00186 592 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 HGSO14964 777 aaPredicted RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 BAG3O95817 575 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 PYGLP06737 847 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 IDEP14735 1019 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 HDAC7Q8WUI4 952 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 RNPC3Q96LT9 517 aaKnown RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 PIGSQ96S52 555 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 EYA3Q99504 573 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 CCNL1Q9UK58 526 aaPredicted RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 DUSP10Q9Y6W6 482 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 ITIH6Q6UXX5 1313 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 BTDP43251 543 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 NNTQ13423 1086 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 PICALMQ13492 652 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 CAPRIN2Q6IMN6 1127 aaKnown RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 PYM1Q9BRP8 204 aaKnown RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 VCPKMTQ9H867 229 aa10.33□□□□□ -0.76
SMG6-202ENST00000354901 RTCBQ9Y3I0 505 aaKnown RBP10.33□□□□□ -0.76
SMG6-202ENST00000354901 LGALS16A8MUM7 142 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 KLRC4O43908 158 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 FSBPO95073 299 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 IPO7O95373 1038 aaKnown RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 RASA1P20936 1047 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 ODF2Q5BJF6 829 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 ANKRD40Q6AI12 368 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 TRIM68Q6AZZ1 485 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 CCDC26Q8TAB7 109 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 GJA10Q969M2 543 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 BARHL2Q9NY43 387 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SNUPNO95149 360 aaKnown RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 CXCR5P32302 372 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 LSP1P33241 339 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 AARSP49588 968 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG6-202ENST00000354901 GNAQP50148 359 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 DDR1Q08345 913 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SPRED3Q2MJR0 410 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SLC27A3Q5K4L6 730 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 FAM196AQ6ZSG2 479 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 KRT26Q7Z3Y9 468 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SEPT12Q8IYM1 358 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 COA7Q96BR5 231 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 NOC4LQ9BVI4 516 aaKnown RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 OPA1O60313 960 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 RFC4P35249 363 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 USP4Q13107 963 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 NONOQ15233 471 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG6-202ENST00000354901 C11orf91Q3C1V1 193 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 TTMPQ5BVD1 217 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 WDR59Q6PJI9 974 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 WDR66Q8TBY9 1149 aa10.32□□□□□ -0.76
SMG6-202ENST00000354901 SMCR8Q8TEV9 937 aaPredicted RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
SMG6-202ENST00000354901 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms