RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SWSAP1Q6NVH7 229 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 CACTIN-AS1Q8N1I8 211 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 JADE3Q92613 823 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SLC5A5Q92911 643 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 ELF4Q99607 663 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 RSAD1Q9HA92 442 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SMURF1Q9HCE7 757 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 MKS1Q9NXB0 559 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 TERF2IPQ9NYB0 399 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 PHTF1Q9UMS5 762 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 PCDHA11Q9Y5I1 949 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 FHOD1Q9Y613 1164 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 TNS2Q63HR2 1409 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 GAS7O60861 476 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 FKTNO75072 461 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 EOMESO95936 686 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 NBPF7P0C2Y1 421 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 FPR2P25090 351 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SRSF2Q01130 221 aaKnown RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SART3Q15020 963 aaKnown RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 LONRF1Q17RB8 773 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 RSPO4Q2I0M5 234 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SGO2Q562F6 1265 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 DIEXFQ68CQ4 756 aaKnown RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 ESRP1Q6NXG1 681 aaKnown RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 UBE2R2Q712K3 238 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 MAMDC2Q7Z304 686 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SIRT2Q8IXJ6 389 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 HSPBAP1Q96EW2 488 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 ZNF496Q96IT1 587 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 NT5C1BQ96P26 610 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SUGCTQ9HAC7 445 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 PIDD1Q9HB75 910 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 CCM2LQ9NUG4 571 aaPredicted RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SAGE1Q9NXZ1 904 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 PUF60Q9UHX1 559 aaKnown RBP2.09□□□□□ -2.07
BRCA1-202ENST00000354071 TUBD1Q9UJT1 453 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 C2orf71A6NGG8 1288 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 RASSF10A6NK89 507 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 TPP1O14773 563 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 ZEB2O60315 1214 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 EFCAB14O75071 495 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 AMY2AP04746 511 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 SRGNP10124 158 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 CPEP16870 476 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 AMY2BP19961 511 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 ALAS2P22557 587 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 NOS3P29474 1203 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 CCT2P78371 535 aaKnown RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 HDAC1Q13547 482 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 MBTPS1Q14703 1052 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 ACBD5Q5T8D3 534 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 ANO1Q5XXA6 986 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 SPTY2D1Q68D10 685 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 FOXR1Q6PIV2 292 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 SRLQ86TD4 932 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 NLRP10Q86W26 655 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 NME8Q8N427 588 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 DTWD2Q8NBA8 298 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 CHST14Q8NCH0 376 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 FAM156AQ8NDB6 213 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 SYTL5Q8TDW5 730 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 RELTQ969Z4 430 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 MEGF10Q96KG7 1140 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 LUZP4Q9P127 313 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 POLHQ9Y253 713 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 NKRFO15226 690 aaKnown RBP eCLIP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 LRIG2O94898 1065 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 FGAP02671 866 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 C5AR1P21730 350 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 HOXC12P31275 282 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 KPNA1P52294 538 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 RBM10P98175 930 aaKnown RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 OS9Q13438 667 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 SAFBQ15424 915 aaKnown RBP eCLIP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 POMZP3Q6PJE2 187 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 LBX2Q6XYB7 198 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 TOP6BLQ8N6T0 577 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 MYRIPQ8NFW9 859 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 RTF1Q92541 710 aaKnown RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 EZH1Q92800 747 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 WNT8BQ93098 351 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 STRBPQ96SI9 672 aaKnown RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 FOXP3Q9BZS1 431 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 TMX4Q9H1E5 349 aaPredicted RBP2.09□□□□□ -2.08
BRCA1-202ENST00000354071 AP5S1Q9NUS5 200 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 DMTF1Q9Y222 760 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 IPPQ9Y573 584 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 PTPRTO14522 1441 aa2.09□□□□□ -2.08
BRCA1-202ENST00000354071 NBPF19A0A087WUL8 3843 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 CDK12Q9NYV4 1490 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 PRR19A6NJB7 356 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 ADAMTS4O75173 837 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 STK3Q13188 491 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 TRAPPC3LQ5T215 181 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 IFIT1BQ5T764 474 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 OVCH2Q7RTZ1 564 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 PTRH1Q86Y79 214 aaKnown RBP2.08□□□□□ -2.08
BRCA1-202ENST00000354071 GRAMD1CQ8IYS0 662 aa2.08□□□□□ -2.08
BRCA1-202ENST00000354071 DTWD1Q8N5C7 304 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms