RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MTMR2Q13614 643 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 MCM6Q14566 821 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 FILIP1LQ4L180 1135 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 MSANTD4Q8NCY6 345 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 TBCKQ8TEA7 893 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 GJA10Q969M2 543 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 C6orf50Q9HD87 102 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 RIC8AQ9NPQ8 531 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 CTNND2Q9UQB3 1225 aa9.61□□□□□ -0.87
TRIM55-204ENST00000353317 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-204ENST00000353317 CCDC194A0A1B0GVG4 234 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 CTAGE9A4FU28 777 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 STAT2P52630 851 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 KRT31Q15323 416 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 MUM1L1Q5H9M0 696 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-204ENST00000353317 FERMT2Q96AC1 680 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 L3MBTL3Q96JM7 780 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-204ENST00000353317 UIMC1Q96RL1 719 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 MTRQ99707 1265 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 BLZF1Q9H2G9 400 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 PDE11AQ9HCR9 933 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ABHD10Q9NUJ1 306 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 PCNTO95613 3336 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ITIH6Q6UXX5 1313 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ADCY7P51828 1080 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 CCDC174Q6PII3 467 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 SCYL3Q8IZE3 742 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 REXO1Q8N1G1 1221 aaKnown RBP9.6□□□□□ -0.87
TRIM55-204ENST00000353317 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 CCDC51Q96ER9 411 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 PSTPIP2Q9H939 334 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 L1RE1Q9UN81 338 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 ZNF536O15090 1300 aa9.6□□□□□ -0.87
TRIM55-204ENST00000353317 GLTPD2A6NH11 291 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 PP2D1A8MPX8 630 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 N4BP3O15049 544 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 SLC37A4O43826 429 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 TDP2O95551 362 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 GNA11P29992 359 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 ARHGAP25P42331 645 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 E2F4Q16254 413 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 LETM2Q2VYF4 491 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM55-204ENST00000353317 LRRC15Q8TF66 581 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 RHOXF2Q9BQY4 288 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 VPS16Q9H269 839 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 SYNPO2Q9UMS6 1093 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 ZHX2Q9Y6X8 837 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 WDR90Q96KV7 1748 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 N4BP1O75113 896 aaKnown RBP9.59□□□□□ -0.87
TRIM55-204ENST00000353317 HOXA13P31271 388 aaPredicted RBP9.59□□□□□ -0.87
TRIM55-204ENST00000353317 EPHX2P34913 555 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 TRAPPC10P48553 1259 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 LMAN1P49257 510 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 VSNL1P62760 191 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 NONOQ15233 471 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM55-204ENST00000353317 HDXQ7Z353 690 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 FBXO11Q86XK2 927 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 TMTC1Q8IUR5 882 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 PSD3Q9NYI0 1048 aa9.59□□□□□ -0.87
TRIM55-204ENST00000353317 LIMA1Q9UHB6 759 aaKnown RBP9.59□□□□□ -0.87
TRIM55-204ENST00000353317 CCNT1O60563 726 aaKnown RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 PEX10O60683 326 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 VCAM1P19320 739 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 TUBB2AQ13885 445 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 RRAGBQ5VZM2 374 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 PDXDC2PQ6P474 469 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 KRT26Q7Z3Y9 468 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 POTEDQ86YR6 584 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 NOA1Q8NC60 698 aaKnown RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 NAPGQ99747 312 aaPredicted RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 TUBB2BQ9BVA1 445 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 AMNQ9BXJ7 453 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 RANBP17Q9H2T7 1088 aaKnown RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 VPS18Q9P253 973 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 POTEB2H3BUK9 544 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 hCG_1984214I3L0E3 225 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 BMP15O95972 392 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 COPB1P53618 953 aaKnown RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 HMGCS2P54868 508 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 VGLL4Q14135 290 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 DCAF15Q66K64 600 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 DPY19L2Q6NUT2 758 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 CYP26C1Q6V0L0 522 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 ZNF713Q8N859 430 aaPredicted RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 IQUBQ8NA54 791 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms