RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SGSM1Q2NKQ1 1148 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 KIFAP3Q92845 792 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 TRIM47Q96LD4 638 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 MMTAG2Q9BU76 263 aaKnown RBP14.52□□□□□ -0.09
IFT88-202ENST00000351808 THAP9Q9H5L6 903 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 ARHGEF3Q9NR81 526 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 PNMA3Q9UL41 463 aa14.52□□□□□ -0.09
IFT88-202ENST00000351808 CREB3O43889 395 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 STAT6P42226 847 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 RAD23BP54727 409 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 CDK17Q00537 523 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 KLC1Q07866 573 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 MYBPC3Q14896 1274 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 ATXN2LQ8WWM7 1075 aaKnown RBP14.51□□□□□ -0.09
IFT88-202ENST00000351808 ANKRD27Q96NW4 1050 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 PRMT1Q99873 361 aaKnown RBP14.51□□□□□ -0.09
IFT88-202ENST00000351808 RAB17Q9H0T7 212 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 MYH1P12882 1939 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 ABLIM1O14639 778 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 MYBP10242 640 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 GNAZP19086 355 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 ATP6V1C1P21283 382 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 IFNAR2P48551 515 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 TNNC1P63316 161 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 SDCCAG8Q86SQ7 713 aaPredicted RBP14.51□□□□□ -0.09
IFT88-202ENST00000351808 TBC1D10CQ8IV04 446 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 KIAA0825Q8IV33 1275 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 TLCD1Q96CP7 247 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 MYD88Q99836 296 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 PUS7LQ9H0K6 701 aaKnown RBP14.51□□□□□ -0.09
IFT88-202ENST00000351808 CWC25Q9NXE8 425 aaPredicted RBP14.51□□□□□ -0.09
IFT88-202ENST00000351808 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
IFT88-202ENST00000351808 A0A0G2JS52 829 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 HGSO14964 777 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 RPN1P04843 607 aaKnown RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 MAGEA10P43363 369 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 ZNF131P52739 623 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 GALNTL6Q49A17 601 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 APLFQ8IW19 511 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 FGD4Q96M96 766 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.5□□□□□ -0.09
IFT88-202ENST00000351808 WNT7AO00755 349 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 PALMO75781 387 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 NEXNQ0ZGT2 675 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 BNIP1Q12981 228 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 DYNC1I2Q13409 638 aaKnown RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 CUL1Q13616 776 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 ACBD5Q5T8D3 534 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 RBM17Q96I25 401 aaKnown RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 PBKQ96KB5 322 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 INPP4AQ96PE3 977 aaPredicted RBP14.5□□□□□ -0.09
IFT88-202ENST00000351808 ANAPC4Q9UJX5 808 aa14.5□□□□□ -0.09
IFT88-202ENST00000351808 SMAPO00193 183 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 ATP6V1G1O75348 118 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 EHHADHQ08426 723 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 MTMR3Q13615 1198 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 PLS1Q14651 629 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 DBN1Q16643 649 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 EARS2Q5JPH6 523 aaKnown RBP14.49□□□□□ -0.09
IFT88-202ENST00000351808 FOXB2Q5VYV0 432 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 FBF1Q8TES7 1133 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
IFT88-202ENST00000351808 WASF1Q92558 559 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 PLAGL2Q9UPG8 496 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 NKRFO15226 690 aaKnown RBP eCLIP14.49□□□□□ -0.09
IFT88-202ENST00000351808 SLC1A4P43007 532 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 GFPT1Q06210 699 aaPredicted RBP14.49□□□□□ -0.09
IFT88-202ENST00000351808 DHX9Q08211 1270 aaKnown RBP14.49□□□□□ -0.09
IFT88-202ENST00000351808 ZNF174Q15697 407 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 TMEM67Q5HYA8 995 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 OR52E8Q6IFG1 317 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 MPRIPQ6WCQ1 1025 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 ADSSL1Q8N142 457 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 USP38Q8NB14 1042 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 IGDCC4Q8TDY8 1250 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 IFT74Q96LB3 600 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 INTS9Q9NV88 658 aaKnown RBP14.49□□□□□ -0.09
IFT88-202ENST00000351808 MYH6P13533 1939 aa14.49□□□□□ -0.09
IFT88-202ENST00000351808 ECM29Q5VYK3 1845 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 TLDC2A0PJX2 215 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 GRID2IPA4D2P6 1211 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 F8VZ95 297 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 SNX3O60493 162 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 PEX5P50542 639 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 PDXDC2PQ6P474 469 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 UCMAQ8WVF2 138 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 DTNBP1Q96EV8 351 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 ADAM7Q9H2U9 754 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 PREBQ9HCU5 417 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 ABCC12Q96J65 1359 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 EPHB6O15197 1021 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 DAPK3O43293 454 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 IFNAR1P17181 557 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 GBP1P32455 592 aa14.48□□□□□ -0.09
IFT88-202ENST00000351808 RNASELQ05823 741 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms