RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TMEM139Q8IV31 216 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 GPC2Q8N158 579 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CCAR2Q8N163 923 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 PRPF38AQ8NAV1 312 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 KIAA0895Q8NCT3 520 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CCDC112Q8NEF3 446 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 TRPM4Q8TD43 1214 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 SLC5A5Q92911 643 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 P2RX5Q93086 422 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 HOOK2Q96ED9 719 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CDK5RAP3Q96JB5 506 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 FEZ1Q99689 392 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 SLF1Q9BQI6 1058 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 SLC38A10Q9HBR0 1119 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 MAP3K20Q9NYL2 800 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 PNMA2Q9UL42 364 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 RABGAP1Q9Y3P9 1069 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 FRMPD4Q14CM0 1322 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CACNA1AO00555 2505 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 BICDL2A1A5D9 508 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 FRMD3A2A2Y4 597 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 TRIM49BA6NDI0 452 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 KCNJ18B7U540 433 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 MEIS1O00470 390 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 MARCH6O60337 910 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 COBLO75128 1261 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 MED24O75448 989 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 PSMD10O75832 226 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 CFBP00751 764 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 FDX1P10109 184 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 FCER1AP12319 257 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 PTPRAP18433 802 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 VCAM1P19320 739 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 EEF1GP26641 437 aaKnown RBP7.73□□□□□ -1.17
TRIM55-203ENST00000350034 RPA1P27694 616 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 STAT3P40763 770 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 USP14P54578 494 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 PPP2R5CQ13362 524 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 KCNJ12Q14500 433 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 FILIP1LQ4L180 1135 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 ANGEL2Q5VTE6 544 aaKnown RBP7.73□□□□□ -1.17
TRIM55-203ENST00000350034 E4F1Q66K89 784 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-203ENST00000350034 HAUS3Q68CZ6 603 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 ANKRD40Q6AI12 368 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 FCHSD1Q86WN1 690 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 CATSPER3Q86XQ3 398 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 GUF1Q8N442 669 aaKnown RBP7.73□□□□□ -1.17
TRIM55-203ENST00000350034 TC2NQ8N9U0 490 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 ERMNQ8TAM6 284 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 CYP2W1Q8TAV3 490 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 DDX12PQ92771 950 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 POLR3CQ9BUI4 534 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-203ENST00000350034 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 EHMT1Q9H9B1 1298 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 PPP1R9AQ9ULJ8 1098 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 ADAMTS5Q9UNA0 930 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 KIAA1024Q9UPX6 916 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 MAPK8IP1Q9UQF2 711 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 PCDHA2Q9Y5H9 948 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 MYH7BA7E2Y1 1941 aa7.73□□□□□ -1.17
TRIM55-203ENST00000350034 SSC5DA1L4H1 1573 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 A0A1W2PQC6 194 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 POTEB3A0JP26 581 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 CCDC85CA6NKD9 419 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 USP27XA6NNY8 438 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 LGALS16A8MUM7 142 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 POTECB2RU33 542 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 C19orf81C9J6K1 198 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 E9PMD0 336 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 EML1O00423 815 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 PLA2G4BP0C869 781 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 BCRP11274 1271 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 CYP11B2P19099 503 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 MUTP22033 750 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 EPS15P42566 896 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 SLC12A3P55017 1021 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 BACE1P56817 501 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 COASYQ13057 564 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 SPP2Q13103 211 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 MTMR2Q13614 643 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 TPD52L1Q16890 204 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-203ENST00000350034 ZCWPW2Q504Y3 356 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 CEP55Q53EZ4 464 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 POTEBQ6S5H4 581 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 ARHGAP27Q6ZUM4 889 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 OTOP1Q7RTM1 612 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 NIPA1Q7RTP0 329 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 SYT2Q8N9I0 419 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-203ENST00000350034 ZNF280CQ8ND82 737 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 ANKRD20A12PQ8NF67 263 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 REPS2Q8NFH8 660 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 ZNF507Q8TCN5 953 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 PANX2Q96RD6 677 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 HSD17B14Q9BPX1 270 aa7.72□□□□□ -1.17
TRIM55-203ENST00000350034 SRRTQ9BXP5 876 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms