RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 AENQ8WTP8 325 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 CWC15Q9P013 229 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 RIMBP2O15034 1052 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 PPP1R2P41236 205 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 GTF2IP78347 998 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 COASYQ13057 564 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 KCTD1Q719H9 257 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 CCDC84Q86UT8 332 aaPredicted RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 FNBP4Q8N3X1 1017 aaPredicted RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 MMGT1Q8N4V1 131 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 RBM12Q9NTZ6 932 aaKnown RBP20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
PTP4A3-202ENST00000349124 RAD21O60216 631 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 MARCH6O60337 910 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 MCM3P25205 808 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 KLHDC7AQ5VTJ3 777 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 NGLY1Q96IV0 654 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 POLD4Q9HCU8 107 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 DDX25Q9UHL0 483 aaKnown RBP20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 GGA1Q9UJY5 639 aa20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 PACSIN2Q9UNF0 486 aaPredicted RBP20.02■□□□□ 0.8
PTP4A3-202ENST00000349124 VGLL3A8MV65 326 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L10C9JJH3 530 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 C6orf229H3BNL8 230 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 LCA5LO95447 670 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 NOVP48745 357 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 PDIA5Q14554 519 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 MYOCDQ8IZQ8 938 aa20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 TSEN2Q8NCE0 465 aaKnown RBP20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 TNRC6CQ9HCJ0 1690 aaKnown RBP20.02■□□□□ 0.79
PTP4A3-202ENST00000349124 ZSCAN5CA6NGD5 496 aaPredicted RBP20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L15C9J2P7 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L13C9JLJ4 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L11C9JVI0 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L18D6R9N7 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L22D6RA61 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L17D6RBQ6 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L19D6RCP7 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L20D6RJB6 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 IL1R1P14778 569 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 POLR2FP61218 127 aaKnown RBP20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L24Q0WX57 530 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 TMEM119Q4V9L6 283 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 TTC19Q6DKK2 380 aaPredicted RBP20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 USP17L6PQ6QN14 398 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 PANK4Q9NVE7 773 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 GOLGA6BA6NDN3 693 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 SMARCA1P28370 1054 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 NT5C2P49902 561 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 LRRC63Q05C16 580 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 SHROOM1Q2M3G4 852 aaPredicted RBP20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 CCDC40Q4G0X9 1142 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 HAUS3Q68CZ6 603 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 GOLGA6L1Q8N7Z2 621 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 KIAA1024Q9UPX6 916 aa20.01■□□□□ 0.79
PTP4A3-202ENST00000349124 ESYT3A0FGR9 886 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 RGL2O15211 777 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 FTCDO95954 541 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 STAT3P40763 770 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 DNAJC21Q5F1R6 531 aaKnown RBP20■□□□□ 0.79
PTP4A3-202ENST00000349124 FAM83BQ5T0W9 1011 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 CCDC181Q5TID7 509 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 DDX60LQ5H9U9 1706 aaKnown RBP20■□□□□ 0.79
PTP4A3-202ENST00000349124 ZCWPW2Q504Y3 356 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 LSM14BQ9BX40 385 aaKnown RBP20■□□□□ 0.79
PTP4A3-202ENST00000349124 PACSIN1Q9BY11 444 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 ZHX3Q9H4I2 956 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 PCDHA12Q9UN75 941 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 HYOU1Q9Y4L1 999 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 COL4A3BPQ9Y5P4 624 aa20■□□□□ 0.79
PTP4A3-202ENST00000349124 FAM26FQ5R3K3 315 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 TBC1D16Q8TBP0 767 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 POTEB3A0JP26 581 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 POTECB2RU33 542 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 RPS6KA5O75582 802 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 FKBP3Q00688 224 aaKnown RBP19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 GABPAQ06546 454 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 TRADDQ15628 312 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 PTPROQ16827 1216 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 POTEBQ6S5H4 581 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 ALS2CR12Q96Q35 445 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 RAB34Q9BZG1 259 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 BCAS3Q9H6U6 928 aa19.99■□□□□ 0.79
PTP4A3-202ENST00000349124 FGFR1OPO95684 399 aaKnown RBP19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 IVLP07476 585 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 PLCG2P16885 1265 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 SCNN1DP51172 638 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 C15orf52Q6ZUT6 534 aaKnown RBP19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 FAM163AQ96GL9 167 aaPredicted RBP19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 TSG101Q99816 390 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 RIC8AQ9NPQ8 531 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 PNMA6FA0A0J9YX94 578 aa19.98■□□□□ 0.79
PTP4A3-202ENST00000349124 MPHOSPH10O00566 681 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms