RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 INTS8Q75QN2 995 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 SMCR8Q8TEV9 937 aaPredicted RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 SNAP23O00161 211 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 ATP1A1P05023 1023 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 GSPT2Q8IYD1 628 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 EIF3CLB5ME19 914 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 EXOC3O60645 756 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 LRRC63Q05C16 580 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 EIF3CQ99613 913 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 HPSEQ9Y251 543 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 TTLL1O95922 423 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 PSMD2Q13200 908 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 EXOC3L4Q17RC7 722 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 FBF1Q8TES7 1133 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 MAP3K14Q99558 947 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 ZBTB21Q9ULJ3 1066 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 ATP11AP98196 1134 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 C6orf163Q5TEZ5 329 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 CSRNP1Q96S65 589 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 FOSP01100 380 aaPredicted RBP16.13■□□□□ 0.17
NUP50-201ENST00000347635 ARHGAP44Q17R89 818 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 GLE1Q53GS7 698 aaKnown RBP16.13■□□□□ 0.17
NUP50-201ENST00000347635 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 WHAMMQ8TF30 809 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 PIGSQ96S52 555 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 KIAA1024Q9UPX6 916 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 USH1GQ495M9 461 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
NUP50-201ENST00000347635 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 CAPN11Q9UMQ6 739 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 C3P01024 1663 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 ARHGEF35A5YM69 484 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 KRT5P13647 590 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 FXR1P51114 621 aaKnown RBP eCLIP16.13■□□□□ 0.17
NUP50-201ENST00000347635 FAM133AQ8N9E0 248 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 DYNLL2Q96FJ2 89 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 ASIC3Q9UHC3 531 aa16.13■□□□□ 0.17
NUP50-201ENST00000347635 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 CLNS1AP54105 237 aaKnown RBP16.12■□□□□ 0.17
NUP50-201ENST00000347635 NCAPHQ15003 741 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 RGL2O15211 777 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 NMT2O60551 498 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 NR1D1P20393 614 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 IFT88Q13099 833 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 GRM1Q13255 1194 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 PRR16Q569H4 304 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 CEP128Q6ZU80 1094 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 CSF1RP07333 972 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 NR2F2P24468 414 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 FBXO11Q86XK2 927 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
NUP50-201ENST00000347635 PGRMC1O00264 195 aaKnown RBP16.12■□□□□ 0.17
NUP50-201ENST00000347635 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 SMTNP53814 917 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 COG1Q8WTW3 980 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 IQCGQ9H095 443 aaKnown RBP16.12■□□□□ 0.17
NUP50-201ENST00000347635 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
NUP50-201ENST00000347635 MRPS25P82663 173 aaKnown RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 PBKQ96KB5 322 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 FAM114A2Q9NRY5 505 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 SF3A3Q12874 501 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP50-201ENST00000347635 SEPT2Q15019 361 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 TADA2BQ86TJ2 420 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 MYCBPQ99417 103 aaPredicted RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 ANKRD65E5RJM6 399 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 PSD3Q9NYI0 1048 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 CFBP00751 764 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 AFPP02771 609 aaKnown RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 GYPCP04921 128 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 ALDH3A1P30838 453 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 SEMA3FQ13275 785 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 C10orf76Q5T2E6 689 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 ZNF365Q70YC5 407 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 EPB41L4AQ9HCS5 686 aaPredicted RBP16.11■□□□□ 0.17
NUP50-201ENST00000347635 KCND1Q9NSA2 647 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 BAIAP2L1Q9UHR4 511 aa16.11■□□□□ 0.17
NUP50-201ENST00000347635 GRIN1Q05586 938 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 SRLQ86TD4 932 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms