RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 ITGB5P18084 799 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CCND2P30279 289 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CPT1AP50416 773 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 RCAN1P53805 252 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
RAB5C-201ENST00000346213 MYSM1Q5VVJ2 828 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 WNT8AQ9H1J5 351 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
RAB5C-201ENST00000346213 GGPS1O95749 300 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CYP2C9P11712 490 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CYP2C18P33260 490 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
RAB5C-201ENST00000346213 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 SMARCC2Q8TAQ2 1214 aa18.47■□□□□ 0.55
RAB5C-201ENST00000346213 EMID1Q96A84 441 aaPredicted RBP18.47■□□□□ 0.55
RAB5C-201ENST00000346213 MTG1Q9BT17 334 aaPredicted RBP18.47■□□□□ 0.55
RAB5C-201ENST00000346213 DOCK5Q9H7D0 1870 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 COL6A3P12111 3177 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 A0A1W2PPC1 479 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 DCDC2CA8MYV0 355 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 ATP9AO75110 1047 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 CABYRO75952 493 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
RAB5C-201ENST00000346213 CLK2P49760 499 aaKnown RBP18.46■□□□□ 0.55
RAB5C-201ENST00000346213 PCNX4Q63HM2 1172 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 CYP2W1Q8TAV3 490 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 MPHOSPH6Q99547 160 aaKnown RBP18.46■□□□□ 0.55
RAB5C-201ENST00000346213 TM6SF1Q9BZW5 370 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 BARHL2Q9NY43 387 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 PCDHA6Q9UN73 950 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 PCDHA8Q9Y5H6 950 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 EYSQ5T1H1 3165 aa18.46■□□□□ 0.55
RAB5C-201ENST00000346213 CHD9Q3L8U1 2897 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 SPATA31C2B4DYI2 1134 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 EDIL3O43854 480 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 TIMP1P01033 207 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 RAG1P15918 1043 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 NAPAP54920 295 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
RAB5C-201ENST00000346213 WNT8BQ93098 351 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
RAB5C-201ENST00000346213 SLKQ9H2G2 1235 aaPredicted RBP18.45■□□□□ 0.54
RAB5C-201ENST00000346213 POLR3EQ9NVU0 708 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 PRKAG2Q9UGJ0 569 aa18.45■□□□□ 0.54
RAB5C-201ENST00000346213 B4DLN1 442 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 ST18O60284 1047 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 LARGE1O95461 756 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 CSF2RAP15509 400 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 PSMA5P28066 241 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 ICAM3P32942 547 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
RAB5C-201ENST00000346213 FGD1P98174 961 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 FAM109BQ6ICB4 259 aaPredicted RBP18.44■□□□□ 0.54
RAB5C-201ENST00000346213 PPTC7Q8NI37 304 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 DHX38Q92620 1227 aaKnown RBP18.44■□□□□ 0.54
RAB5C-201ENST00000346213 AIFM3Q96NN9 605 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 RIC8AQ9NPQ8 531 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 HAS3O00219 553 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 ZEB2O60315 1214 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 TRAF1Q13077 416 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 STK3Q13188 491 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 GDF6Q6KF10 455 aaPredicted RBP18.44■□□□□ 0.54
RAB5C-201ENST00000346213 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 LBHD1Q9BQE6 289 aaPredicted RBP18.44■□□□□ 0.54
RAB5C-201ENST00000346213 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 UBIAD1Q9Y5Z9 338 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 CYP46A1Q9Y6A2 500 aa18.44■□□□□ 0.54
RAB5C-201ENST00000346213 F2P00734 622 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 ACRP10323 421 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 SCG2P13521 617 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 KCNA2P16389 499 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 CCL23P55773 120 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 CHMP4BP1P59074 171 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
RAB5C-201ENST00000346213 MFSD5Q6N075 450 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 Q7L0L9 218 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 DHX37Q8IY37 1157 aaKnown RBP18.43■□□□□ 0.54
RAB5C-201ENST00000346213 RASGRP4Q8TDF6 673 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 SPATA33Q96N06 139 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.43■□□□□ 0.543e-6■■■■□ 22.3
RAB5C-201ENST00000346213 TPCN1Q9ULQ1 816 aa18.43■□□□□ 0.54
RAB5C-201ENST00000346213 MROH7Q68CQ1 1323 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 PRPF3O43395 683 aaKnown RBP18.42■□□□□ 0.54
RAB5C-201ENST00000346213 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 CRYGNQ8WXF5 182 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 SCLYQ96I15 445 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 ANO3Q9BYT9 981 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 PDRG1Q9NUG6 133 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
RAB5C-201ENST00000346213 IFNAR1P17181 557 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 FPGSQ05932 587 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 LAMC2Q13753 1193 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 GPNMBQ14956 572 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 NPY5RQ15761 445 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms