RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 NOVA2Q9UNW9 492 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 TULP2O00295 520 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 EEF1GP26641 437 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 PEX26Q7Z412 305 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 MRPS25P82663 173 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 KCNV2Q8TDN2 545 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 KRT12Q99456 494 aa16.88■□□□□ 0.29
SRPK1-201ENST00000346162 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
SRPK1-201ENST00000346162 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■■□□□ 13.2
SRPK1-201ENST00000346162 CHGBP05060 677 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 ALX1Q15699 326 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 HSP90AA5PQ58FG0 334 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 RESP18Q5W5W9 173 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 DGKHQ86XP1 1220 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 DPH5Q9H2P9 285 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 PAX7P23759 505 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 SEPT2Q15019 361 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 ZNF658Q5TYW1 1059 aaPredicted RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 BCRP11274 1271 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 MAP7D1Q3KQU3 841 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 FNBP4Q8N3X1 1017 aaPredicted RBP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 PIGSQ96S52 555 aa16.87■□□□□ 0.29
SRPK1-201ENST00000346162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.87■□□□□ 0.29
SRPK1-201ENST00000346162 hCG_2014768A0A024R1R8 64 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 GMNCA6NCL1 334 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PRDX5P30044 214 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 STAT1P42224 750 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
SRPK1-201ENST00000346162 HHATQ5VTY9 493 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 KIRREL3Q8IZU9 778 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PAGE5Q96GU1 130 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 TMEM232C9JQI7 657 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 KCNK3O14649 394 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 BUB1O43683 1085 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 ZBED4O75132 1171 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 TTLL1O95922 423 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 ATP2A2P16615 1042 aaKnown RBP16.86■□□□□ 0.29
SRPK1-201ENST00000346162 CDC27P30260 824 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 ADAM9Q13443 819 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 ARHGAP44Q17R89 818 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 HAUS2Q9NVX0 235 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 KIAA1024Q9UPX6 916 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 STK36Q9NRP7 1315 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PPP2R5EQ16537 467 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 UBL4BQ8N7F7 174 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 P2RX5Q93086 422 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PANX2Q96RD6 677 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 CXCR5P32302 372 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 CYP4A11Q02928 519 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 CFAP61Q8NHU2 1237 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 SREK1Q8WXA9 508 aaKnown RBP16.86■□□□□ 0.29
SRPK1-201ENST00000346162 AMNQ9BXJ7 453 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 SUGCTQ9HAC7 445 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PARP2Q9UGN5 583 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 PXDNLA1KZ92 1463 aa16.86■□□□□ 0.29
SRPK1-201ENST00000346162 SLC8A3P57103 927 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 POLR2FP61218 127 aaKnown RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 MRRFQ96E11 262 aaKnown RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 EVI5O60447 810 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 HNRNPCP07910 306 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■□□□ 11.7
SRPK1-201ENST00000346162 CYP2J2P51589 502 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 GRAPQ13588 217 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 COL4A3BPQ9Y5P4 624 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 NIM1KQ8IY84 436 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 ELAC2Q9BQ52 826 aaKnown RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 TMOD4Q9NZQ9 345 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms