RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CYP3A7P24462 503 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 USP11P51784 963 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
UPF3B-202ENST00000345865 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
UPF3B-202ENST00000345865 TERF2Q15554 542 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 AOC3Q16853 763 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 ZNF662Q6ZS27 426 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 TRAPPC11Q7Z392 1133 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 GPIHBP1Q8IV16 184 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
UPF3B-202ENST00000345865 PANK4Q9NVE7 773 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
UPF3B-202ENST00000345865 PLAGL2Q9UPG8 496 aa17.16■□□□□ 0.34
UPF3B-202ENST00000345865 MED24O75448 989 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 NDUFB10O96000 172 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 ATP1A1P05023 1023 aaKnown RBP17.15■□□□□ 0.34
UPF3B-202ENST00000345865 CYLC1P35663 651 aaPredicted RBP17.15■□□□□ 0.34
UPF3B-202ENST00000345865 KRT83P78385 493 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 WHAMMP3Q1A5X7 153 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 CCDC170Q8IYT3 715 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 NOA1Q8NC60 698 aaKnown RBP17.15■□□□□ 0.34
UPF3B-202ENST00000345865 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 FUT8Q9BYC5 575 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 ARHGAP20Q9P2F6 1191 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 PLA2G4BP0C869 781 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 HNRNPH3P31942 346 aaKnown RBP17.15■□□□□ 0.34
UPF3B-202ENST00000345865 CDK17Q00537 523 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 TMEM179Q6ZVK1 233 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 MSANTD4Q8NCY6 345 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 ARFGAP3Q9NP61 516 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
UPF3B-202ENST00000345865 ABCB11O95342 1321 aa17.14■□□□□ 0.34
UPF3B-202ENST00000345865 H0YIN7 160 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 ARHGAP4P98171 946 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 ABCB5Q2M3G0 1257 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 USH1GQ495M9 461 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 LENG9Q96B70 501 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 PRMT6Q96LA8 375 aaPredicted RBP17.14■□□□□ 0.33
UPF3B-202ENST00000345865 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 A0A1W2PRG0 241 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 CCDC151A5D8V7 595 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 OPLAHO14841 1288 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 SRGAP2O75044 1071 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
UPF3B-202ENST00000345865 CYP11B2P19099 503 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 LONRF2Q1L5Z9 754 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 GLT8D2Q9H1C3 349 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
UPF3B-202ENST00000345865 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 CTAGE15A4D2H0 777 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 GH2P01242 217 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 RHOXF2BP0C7M4 288 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 CTAGE8P0CG41 777 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 PRR16Q569H4 304 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 STYK1Q6J9G0 422 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 CTAGE6Q86UF2 777 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 CTAGE4Q8IX94 777 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 GMCL1P1Q8NEA9 526 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 BAP1Q92560 729 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
UPF3B-202ENST00000345865 RHOXF2Q9BQY4 288 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 AMNQ9BXJ7 453 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 FAM86B1E9PN63 330 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 KRT86O43790 486 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 FAM86B2P0C5J1 330 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 SLC12A3P55017 1021 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 PSMC6P62333 389 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 CATSPER3Q86XQ3 398 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 NELFCDQ8IXH7 590 aa17.13■□□□□ 0.33
UPF3B-202ENST00000345865 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
UPF3B-202ENST00000345865 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
UPF3B-202ENST00000345865 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
UPF3B-202ENST00000345865 TRAF5O00463 557 aa17.12■□□□□ 0.33
UPF3B-202ENST00000345865 FGFR1OPO95684 399 aaKnown RBP17.12■□□□□ 0.33
UPF3B-202ENST00000345865 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
UPF3B-202ENST00000345865 FKBP3Q00688 224 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms