RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SEMA3FQ13275 785 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 KLHL7Q8IXQ5 586 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 PROCA1Q8NCQ7 364 aaPredicted RBP19.62■□□□□ 0.73
VHL-202ENST00000345392 ATP6V1G3Q96LB4 118 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 CRNKL1Q9BZJ0 848 aaKnown RBP19.62■□□□□ 0.73
VHL-202ENST00000345392 MYMKA6NI61 221 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 MDH1P40925 334 aaKnown RBP19.62■□□□□ 0.73
VHL-202ENST00000345392 AMPD3Q01432 767 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 ARID5AQ03989 594 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 SLC44A5Q8NCS7 719 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 CXorf56Q9H5V9 222 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 PLAAQ9Y263 795 aa19.62■□□□□ 0.73
VHL-202ENST00000345392 DLEC1Q9Y238 1755 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 LAD1O00515 517 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 KLRC1P26715 233 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 OR2W6PQ8NHA6 318 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 IQCDQ96DY2 449 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 AK8Q96MA6 479 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 MAGEF1Q9HAY2 307 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 BARHL2Q9NY43 387 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 RAD51CO43502 376 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 TXKP42681 527 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 SETQ01105 290 aaPredicted RBP19.61■□□□□ 0.73
VHL-202ENST00000345392 KCNMA1Q12791 1236 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 SF3B2Q13435 895 aaKnown RBP19.61■□□□□ 0.73
VHL-202ENST00000345392 TMED8Q6PL24 325 aaPredicted RBP19.61■□□□□ 0.73
VHL-202ENST00000345392 NRAPQ86VF7 1730 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 RNF10Q8N5U6 811 aaKnown RBP19.61■□□□□ 0.73
VHL-202ENST00000345392 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
VHL-202ENST00000345392 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
VHL-202ENST00000345392 TLR2O60603 784 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
VHL-202ENST00000345392 PTPROQ16827 1216 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 LINC00116Q8NCU8 138 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 QTRT2Q9H974 415 aaKnown RBP19.6■□□□□ 0.73
VHL-202ENST00000345392 ATXN2Q99700 1313 aaKnown RBP19.6■□□□□ 0.73
VHL-202ENST00000345392 A0A1B0GUL6 1792 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 SV2BQ7L1I2 683 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 SPATS2Q86XZ4 545 aaKnown RBP19.6■□□□□ 0.73
VHL-202ENST00000345392 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.6■□□□□ 0.73
VHL-202ENST00000345392 PACSIN1Q9BY11 444 aa19.6■□□□□ 0.73
VHL-202ENST00000345392 PPP1R2P41236 205 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 HLTFQ14527 1009 aaKnown RBP eCLIP19.59■□□□□ 0.73
VHL-202ENST00000345392 GPR101Q96P66 508 aaPredicted RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 ZNF652Q9Y2D9 606 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 EP400Q96L91 3159 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 GOLGB1Q14789 3259 aaKnown RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 IBSPP21815 317 aaPredicted RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 NAPAP54920 295 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 FBXO33Q7Z6M2 555 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 CD302Q8IX05 232 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 TBC1D5Q92609 795 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 CALML4Q96GE6 196 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 BLOC1S4Q9NUP1 217 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 TSKSQ9UJT2 592 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 SSU72P8A0A1W2PR75 194 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 GRM4Q14833 912 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 CDC37Q16543 378 aaPredicted RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 SLC9C1Q4G0N8 1177 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 CCDC13Q8IYE1 715 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 MREGQ8N565 214 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 DAGLBQ8NCG7 672 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
VHL-202ENST00000345392 ARPP21Q9UBL0 812 aaPredicted RBP19.59■□□□□ 0.73
VHL-202ENST00000345392 BACH1O14867 736 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 POLR2FP61218 127 aaKnown RBP19.58■□□□□ 0.73
VHL-202ENST00000345392 GRB10Q13322 594 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 DIXDC1Q155Q3 683 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 VPS72Q15906 364 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 LRRC55Q6ZSA7 311 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 DDX42Q86XP3 938 aaKnown RBP eCLIP19.58■□□□□ 0.734e-9■□□□□ 9.6
VHL-202ENST00000345392 GOLPH3Q9H4A6 298 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 RNF14Q9UBS8 474 aa19.58■□□□□ 0.73
VHL-202ENST00000345392 FAM107AO95990 144 aa19.58■□□□□ 0.72
VHL-202ENST00000345392 ACTN3Q08043 901 aaPredicted RBP19.58■□□□□ 0.72
VHL-202ENST00000345392 NONOQ15233 471 aaKnown RBP eCLIP19.58■□□□□ 0.72
VHL-202ENST00000345392 GRIK5Q16478 980 aa19.58■□□□□ 0.72
VHL-202ENST00000345392 FAM83BQ5T0W9 1011 aa19.58■□□□□ 0.72
VHL-202ENST00000345392 YTHDF3Q7Z739 585 aaKnown RBP19.58■□□□□ 0.72
VHL-202ENST00000345392 DGKHQ86XP1 1220 aa19.58■□□□□ 0.72
VHL-202ENST00000345392 ADAMTS1Q9UHI8 967 aa19.58■□□□□ 0.72
VHL-202ENST00000345392 SMCO2A6NFE2 343 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 HMGB1P1B2RPK0 211 aaPredicted RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 NOL4O94818 638 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 NAB2Q15742 525 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 KIAA0753Q2KHM9 967 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 CCDC40Q4G0X9 1142 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 MEI1Q5TIA1 1274 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 EMC10Q5UCC4 262 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 SFMBT2Q5VUG0 894 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 DNAAF5Q86Y56 855 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
VHL-202ENST00000345392 TBCKQ8TEA7 893 aa19.57■□□□□ 0.72
VHL-202ENST00000345392 WHAMMQ8TF30 809 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms