RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SNX21Q969T3 373 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 GPRASP2Q96D09 838 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 CDHR1Q96JP9 859 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 MXRA8Q9BRK3 442 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 UBIAD1Q9Y5Z9 338 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 MKI67P46013 3256 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 M0R2N6 131 aa23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 SORBS3O60504 671 aa23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 MNX1P50219 401 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 NONOQ15233 471 aaKnown RBP eCLIP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 CEP55Q53EZ4 464 aa23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 BRDTQ58F21 947 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 DHX37Q8IY37 1157 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 PCSK9Q8NBP7 692 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 SENP6Q9GZR1 1112 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 C11orf49Q9H6J7 331 aa23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 JADE2Q9NQC1 790 aa23.71■■□□□ 1.39
SMARCB1-202ENST00000344921 MYH7BA7E2Y1 1941 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 SPATA31C2B4DYI2 1134 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 ICAM3P32942 547 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 KCNA10Q16322 511 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 DIS3L2Q8IYB7 885 aaKnown RBP23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 KLHDC9Q8NEP7 349 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 CYP2W1Q8TAV3 490 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 MLXIPQ9HAP2 919 aa23.7■■□□□ 1.39
SMARCB1-202ENST00000344921 ZEB2O60315 1214 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 GGPS1O95749 300 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 CYP3A4P08684 503 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 CPT1AP50416 773 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 SP2Q02086 613 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 NR5A1Q13285 461 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 CUL4AQ13619 759 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 PIK3AP1Q6ZUJ8 805 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 FERMT2Q96AC1 680 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 PKD2L1Q9P0L9 805 aa23.7■■□□□ 1.38
SMARCB1-202ENST00000344921 BTBD18B2RXH4 712 aa23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 MAFGO15525 162 aa23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 UBA1P22314 1058 aaKnown RBP23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 CST5P28325 142 aaPredicted RBP23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 GNL2Q13823 731 aaKnown RBP23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 NEDD9Q14511 834 aa23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 FBXO18Q8NFZ0 1043 aa23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 CRYGNQ8WXF5 182 aa23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 TSEN34Q9BSV6 310 aaKnown RBP23.69■■□□□ 1.38
SMARCB1-202ENST00000344921 ASGR1P07306 291 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 USP11P51784 963 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 ARHGAP1Q07960 439 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 SEMA3FQ13275 785 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 LAMC2Q13753 1193 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 INF2Q27J81 1249 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 VTI1AQ96AJ9 217 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 KCNH7Q9NS40 1196 aa23.68■■□□□ 1.38
SMARCB1-202ENST00000344921 MOXD2PA6NHM9 499 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 FAM86B1E9PN63 330 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 CTAGE5O15320 804 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 FAM86B2P0C5J1 330 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 RGS19P49795 217 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 ACLYP53396 1101 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 CYFIP1Q7L576 1253 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 UBE2Q1Q7Z7E8 422 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 PLA2G4DQ86XP0 818 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 AFG1LQ8WV93 481 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 MEIS1O00470 390 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 GIMAP8Q8ND71 665 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 SPATA33Q96N06 139 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 SENP7Q9BQF6 1050 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
SMARCB1-202ENST00000344921 H3BQV1 296 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 ATP9AO75110 1047 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 HSP90AA1P07900 732 aaKnown RBP23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 MYL3P08590 195 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 ARP10275 920 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 NKX3-2P78367 333 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 PRR16Q569H4 304 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 CCSAPQ6IQ19 270 aaPredicted RBP23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 PHF24Q9UPV7 400 aa23.66■■□□□ 1.38
SMARCB1-202ENST00000344921 A0A1W2PQ45 241 aaPredicted RBP23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 A0A1W2PQY0 241 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 NOP56O00567 594 aaKnown RBP23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 COL6A1P12109 1028 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 SETQ01105 290 aaPredicted RBP23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 SP4Q02446 784 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 LETM2Q2VYF4 491 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 NIPA1Q7RTP0 329 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 EMID1Q96A84 441 aaPredicted RBP23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 GLT1D1Q96MS3 346 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 BCAS3Q9H6U6 928 aa23.65■■□□□ 1.38
SMARCB1-202ENST00000344921 A6NJR5 290 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 CIITAP33076 1130 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 ATN1P54259 1190 aaPredicted RBP23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 LARP1BQ659C4 914 aaKnown RBP23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 CXCL17Q6UXB2 119 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 NEK8Q86SG6 692 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 HTATIP2Q9BUP3 242 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 STARD7Q9NQZ5 370 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 POLR3EQ9NVU0 708 aa23.64■■□□□ 1.38
SMARCB1-202ENST00000344921 DOCK5Q9H7D0 1870 aa23.64■■□□□ 1.37
SMARCB1-202ENST00000344921 KCNA2P16389 499 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms