RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OSTNP61366 133 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 ADAM9Q13443 819 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 MAATS1Q7Z4T9 603 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 TMTC1Q8IUR5 882 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 LZTFL1Q9NQ48 299 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 PXDNQ92626 1479 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 STK36Q9NRP7 1315 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 LRMPQ12912 555 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 MORC3Q14149 939 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 TCP11Q8WWU5 503 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 TBC1D22BQ9NU19 505 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 CGNQ9P2M7 1197 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 IMPACTQ9P2X3 320 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 GPR75-ASB3A0A0A6YYF3 556 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 STK10O94804 968 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 ATP2A2P16615 1042 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 TNNC1P63316 161 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 PPP2R3AQ06190 1150 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 ZNF569Q5MCW4 686 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 DPF3Q92784 378 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 HESX1Q9UBX0 185 aa18.01■□□□□ 0.47
SMARCA4-201ENST00000344626 ARL6IP4Q66PJ3 421 aaKnown RBP18■□□□□ 0.47
SMARCA4-201ENST00000344626 GJA10Q969M2 543 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 JAKMIP2Q96AA8 810 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 TTBK2Q6IQ55 1244 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 GSDMAQ96QA5 445 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 LMBRD1Q9NUN5 540 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 CTTNBP2NLQ9P2B4 639 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 ARHGAP44Q17R89 818 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 SBK1Q52WX2 424 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 CACTINQ8WUQ7 758 aaKnown RBP18■□□□□ 0.47
SMARCA4-201ENST00000344626 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 EFCC1Q9HA90 598 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 PHLPP2Q6ZVD8 1323 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 STK25O00506 426 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 USP50Q70EL3 339 aaPredicted RBP18■□□□□ 0.47
SMARCA4-201ENST00000344626 NSMCE1Q8WV22 266 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 OPTNQ96CV9 577 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 STIM2Q9P246 746 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
SMARCA4-201ENST00000344626 WNT10BO00744 389 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 STAT1P42224 750 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ALCAMQ13740 583 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 KIAA1524Q8TCG1 905 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ANKRD36BP1Q96IX9 119 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 KCNJ18B7U540 433 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 KCNJ12Q14500 433 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ADGRF4Q8IZF3 695 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 CAMKK2Q96RR4 588 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 DENND3A2RUS2 1198 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 RARBP10826 455 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 TWF2Q6IBS0 349 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ATG4CQ96DT6 458 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 CDC25AP30304 524 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 PPP1R7Q15435 360 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ZNF668Q96K58 619 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 LSM14BQ9BX40 385 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 CUL4AQ13619 759 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 DPF2Q92785 391 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 ZNF830Q96NB3 372 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 GINM1Q9NU53 330 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 TRIM17Q9Y577 477 aa17.99■□□□□ 0.47
SMARCA4-201ENST00000344626 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 TIGD1Q96MW7 591 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 HSF2BPO75031 334 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 ORC2Q13416 577 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 NOLC1Q14978 699 aaKnown RBP eCLIP17.98■□□□□ 0.479e-6■□□□□ 8.9
SMARCA4-201ENST00000344626 TKFCQ3LXA3 575 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 CYB5R4Q7L1T6 521 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 MB21D2Q8IYB1 491 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 CCDC114Q96M63 670 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 ZDHHC15Q96MV8 337 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 IQCGQ9H095 443 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 KCNQ5Q9NR82 932 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 ELF1P32519 619 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 RBM10P98175 930 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 KRT76Q01546 638 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 SYCE1Q8N0S2 351 aa17.98■□□□□ 0.47
SMARCA4-201ENST00000344626 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 CLUL1Q15846 466 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 KMT5BQ4FZB7 885 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms