RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CCDC155Q8N6L0 562 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 HERVK_113Q902F9 699 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 KAT2BQ92831 832 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 SPATA33Q96N06 139 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 BRPF3Q9ULD4 1205 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 STXBP5LQ9Y2K9 1186 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 SNX14Q9Y5W7 946 aa23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 LAMA2P24043 3122 aaKnown RBP23.04■■□□□ 1.28
CEACAM3-201ENST00000344550 HAS3O00219 553 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 MAFGO15525 162 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 PARNO95453 639 aaKnown RBP23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 GGPS1O95749 300 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 FGBP02675 491 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 UBA1P22314 1058 aaKnown RBP23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 FUT2Q10981 343 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 METTL7BQ6UX53 244 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 NLRX1Q86UT6 975 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 CMTR1Q8N1G2 835 aaKnown RBP23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 CAGE1Q8TC20 777 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 AGXT2Q9BYV1 514 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 EHMT1Q9H9B1 1298 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 MLXIPQ9HAP2 919 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 NOD1Q9Y239 953 aa23.03■■□□□ 1.28
CEACAM3-201ENST00000344550 KLF18A0A0U1RQI7 1052 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 SPDYE3A6NKU9 549 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 SP2Q02086 613 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 ZNF365Q70YC5 407 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 RETREG2Q8NC44 543 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 GPRASP2Q96D09 838 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 JAKMIP1Q96N16 626 aaKnown RBP23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 WNT8AQ9H1J5 351 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 CNTNAP5Q8WYK1 1306 aa23.02■■□□□ 1.28
CEACAM3-201ENST00000344550 NID2Q14112 1375 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 GOLGA8AA7E2F4 631 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 GOLGA8BA8MQT2 603 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 FOSP01100 380 aaPredicted RBP23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 PSEN2P49810 448 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 RBL2Q08999 1139 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 PTGISQ16647 500 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 HSDL1Q3SXM5 330 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 HEATR3Q7Z4Q2 680 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 CCDC82Q8N4S0 544 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 C7orf31Q8N865 590 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 USP26Q9BXU7 913 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 GTF2IRD1Q9UHL9 959 aa23.01■■□□□ 1.27
CEACAM3-201ENST00000344550 CYP2C9P11712 490 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 RPS6KB1P23443 525 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 EVCP57679 992 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 MFSD10Q14728 455 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 MCTP2Q6DN12 878 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 Q7L0L9 218 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 AFAP1L1Q8TED9 768 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 TCEANC2Q96MN5 208 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 RIC8AQ9NPQ8 531 aa23■■□□□ 1.27
CEACAM3-201ENST00000344550 FAM217BQ9NTX9 383 aaPredicted RBP23■■□□□ 1.27
CEACAM3-201ENST00000344550 V9GY48 417 aaPredicted RBP23■■□□□ 1.27
CEACAM3-201ENST00000344550 METAP2P50579 478 aaKnown RBP eCLIP22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 CCL23P55773 120 aa22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 KIAA0753Q2KHM9 967 aa22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 RAB11FIP4Q86YS3 637 aa22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 BARHL2Q9NY43 387 aa22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 UMODL1Q5DID0 1318 aa22.99■■□□□ 1.27
CEACAM3-201ENST00000344550 NOP56O00567 594 aaKnown RBP22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 WWC2Q6AWC2 1192 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 Q6ZUG5 572 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 C16orf70Q9BSU1 422 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 TM6SF1Q9BZW5 370 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 SEMA6BQ9H3T3 888 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 MYH7BA7E2Y1 1941 aa22.98■■□□□ 1.27
CEACAM3-201ENST00000344550 IQCF3P0C7M6 154 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 ACRP10323 421 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 ACTN1P12814 892 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 NAPAP54920 295 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 PTK7Q13308 1070 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 AP3B2Q13367 1082 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 GDF6Q6KF10 455 aaPredicted RBP22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 BRF1Q92994 677 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 RTEL1Q9NZ71 1219 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 HDAC6Q9UBN7 1215 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 PCDHA6Q9UN73 950 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 PCDHA8Q9Y5H6 950 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 UBIAD1Q9Y5Z9 338 aa22.97■■□□□ 1.27
CEACAM3-201ENST00000344550 hCG_1642624A0A1W2PR95 340 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 H3BRB1 525 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 CDC27P30260 824 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 RAB30Q15771 203 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 PFKFB3Q16875 520 aaPredicted RBP22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 CCDC12Q8WUD4 166 aaPredicted RBP22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 GPKOWQ92917 476 aaPredicted RBP eCLIP22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 CTAGE1Q96RT6 745 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 TUT1Q9H6E5 874 aaKnown RBP22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 ZSWIM6Q9HCJ5 1215 aa22.96■■□□□ 1.27
CEACAM3-201ENST00000344550 ESYT2A0FGR8 921 aa22.95■■□□□ 1.26
CEACAM3-201ENST00000344550 STXBP3O00186 592 aa22.95■■□□□ 1.26
CEACAM3-201ENST00000344550 ZNF286BP0CG31 522 aa22.95■■□□□ 1.26
CEACAM3-201ENST00000344550 DNAJB2P25686 324 aa22.95■■□□□ 1.26
CEACAM3-201ENST00000344550 HOXC8P31273 242 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms