RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SLIT3O75094 1523 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 A0A1W2PQJ5 194 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 ITGA4P13612 1032 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 IFNAR2P48551 515 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 CDK17Q00537 523 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 PDXDC1Q6P996 788 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 MAEAQ7L5Y9 396 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 HEATR3Q7Z4Q2 680 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 BAP1Q92560 729 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
CLCN1-201ENST00000343257 NID2Q14112 1375 aa16.34■□□□□ 0.21
CLCN1-201ENST00000343257 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 USP17L12C9JPN9 530 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 USP17L21D6R901 530 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 GNAT2P19087 354 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 DRP2Q13474 957 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 TLDC1Q6P9B6 456 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 NLRP10Q86W26 655 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 FMNL3Q8IVF7 1028 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 CCDC63Q8NA47 563 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 USP38Q8NB14 1042 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 TBC1D7Q9P0N9 293 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 ATP8A1Q9Y2Q0 1164 aa16.33■□□□□ 0.21
CLCN1-201ENST00000343257 MYH7P12883 1935 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 MYH6P13533 1939 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 MYBL1P10243 752 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 DHX9Q08211 1270 aaKnown RBP16.33■□□□□ 0.2
CLCN1-201ENST00000343257 MREGQ8N565 214 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 RGPD5Q99666 1765 aa16.33■□□□□ 0.2
CLCN1-201ENST00000343257 A0A087X0T9 212 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 H0YGN5 161 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 FAM228BP0C875 321 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 CYP2D6P10635 497 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 SLC8A1P32418 973 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 CCDC50Q8IVM0 306 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 CCT6BQ92526 530 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 PRCCQ92733 491 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 TATDN2Q93075 761 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ELAC2Q9BQ52 826 aaKnown RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 NFS1Q9Y697 457 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 TLR2O60603 784 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ECHS1P30084 290 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 COPB2P35606 906 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 RPS6KA1Q15418 735 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ARL6IP4Q66PJ3 421 aaKnown RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 HGSNATQ68CP4 663 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ZSCAN29Q8IWY8 852 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 CUL5Q93034 780 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 INPP4AQ96PE3 977 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 TRIM37O94972 964 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ANP32DO95626 131 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 SFMBT2Q5VUG0 894 aa16.32■□□□□ 0.2
CLCN1-201ENST00000343257 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-201ENST00000343257 GRID2IPA4D2P6 1211 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 SART1O43290 800 aaKnown RBP16.31■□□□□ 0.2
CLCN1-201ENST00000343257 DRD4P21917 467 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 NBPF9Q3BBW0 867 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 FAM167BQ9BTA0 163 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 MTFR1LQ9H019 292 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 ISCUQ9H1K1 167 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 TTI1O43156 1089 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 CCNT1O60563 726 aaKnown RBP16.31■□□□□ 0.2
CLCN1-201ENST00000343257 RTN2O75298 545 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 VIMP08670 466 aaKnown RBP16.31■□□□□ 0.2
CLCN1-201ENST00000343257 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 MAN2A1Q16706 1144 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 MEI1Q5TIA1 1274 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 LRRC45Q96CN5 670 aa16.31■□□□□ 0.2
CLCN1-201ENST00000343257 PJA2O43164 708 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 DIAPH2O60879 1101 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 CAND2O75155 1236 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 HNRNPH3P31942 346 aaKnown RBP16.3■□□□□ 0.2
CLCN1-201ENST00000343257 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 XRCC4Q13426 336 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 FIGNQ5HY92 759 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 CCDC197Q8NCU1 140 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 TRIM51Q9BSJ1 452 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 TJP1Q07157 1748 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 A8MUI8 341 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 MGRN1O60291 552 aa16.3■□□□□ 0.2
CLCN1-201ENST00000343257 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms