RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 DNM3Q9UQ16 869 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 CIB2O75838 187 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 GAS8O95995 478 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 RASSF2P50749 326 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 TSC22D3Q99576 134 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 ANKRD40Q6AI12 368 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 APBB1IPQ7Z5R6 666 aaPredicted RBP13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 DDX12PQ92771 950 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 CHMP6Q96FZ7 201 aa13.66□□□□□ -0.22
SSX2IP-201ENST00000342203 CLIC2O15247 247 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 EVI5O60447 810 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 PARP2Q9UGN5 583 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 IQGAP1P46940 1657 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 OPHN1O60890 802 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 MYCBPAPQ8TBZ2 947 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 MDM1Q8TC05 714 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 CEP152O94986 1710 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 DDAH1O94760 285 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 ERFP50548 548 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 BIRC3Q13489 604 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 CUL1Q13616 776 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 PTGISQ16647 500 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 CFAP61Q8NHU2 1237 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 ZSCAN5CA6NGD5 496 aaPredicted RBP13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 SEC16BQ96JE7 1060 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
SSX2IP-201ENST00000342203 ADAMTS2O95450 1211 aa13.65□□□□□ -0.23
SSX2IP-201ENST00000342203 GSTO1P78417 241 aa13.65□□□□□ -0.23
SSX2IP-201ENST00000342203 DR1Q01658 176 aa13.65□□□□□ -0.23
SSX2IP-201ENST00000342203 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.23
SSX2IP-201ENST00000342203 AZI2Q9H6S1 392 aa13.65□□□□□ -0.23
SSX2IP-201ENST00000342203 PDHBP11177 359 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 CYB5D1Q6P9G0 228 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 ENAHQ8N8S7 591 aaPredicted RBP13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 GNA14O95837 355 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.235e-7■□□□□ 8.7
SSX2IP-201ENST00000342203 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 PBKQ96KB5 322 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 MIPOL1Q8TD10 442 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 SART1O43290 800 aaKnown RBP13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 ZNF18P17022 549 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 HAUS3Q68CZ6 603 aa13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSX2IP-201ENST00000342203 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 NAIF1Q69YI7 327 aaPredicted RBP13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 FAM107AO95990 144 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 BMP6P22004 513 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 HSPA1LP34931 641 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 PRPF38AQ8NAV1 312 aaKnown RBP13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 ETNK1Q9HBU6 452 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 STK4Q13043 487 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 LRRC8CQ8TDW0 803 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 ITIH6Q6UXX5 1313 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 RAD51CO43502 376 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 PDE6CP51160 858 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 SLF2Q8IX21 1173 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 NSMCE1Q8WV22 266 aa13.63□□□□□ -0.23
SSX2IP-201ENST00000342203 TROVE2P10155 538 aaKnown RBP eCLIP13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 FOXO4P98177 505 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 CHRNDQ07001 517 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 PPP2R5EQ16537 467 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 RILPQ96NA2 401 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 EYA3Q99504 573 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 SYNCQ9H7C4 482 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 ARHGAP42A6NI28 874 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 TRIM37O94972 964 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 MSH2P43246 934 aa13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 TBX2Q13207 712 aaPredicted RBP13.62□□□□□ -0.23
SSX2IP-201ENST00000342203 USH1GQ495M9 461 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms