RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
COL11A2-201ENST00000341947 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
COL11A2-201ENST00000341947 RGS12O14924 1447 aa16.52■□□□□ 0.24
COL11A2-201ENST00000341947 TBC1D10BQ4KMP7 808 aaPredicted RBP16.52■□□□□ 0.23
COL11A2-201ENST00000341947 SIX6OS1Q8N1H7 587 aa16.52■□□□□ 0.23
COL11A2-201ENST00000341947 P2RX5Q93086 422 aa16.52■□□□□ 0.23
COL11A2-201ENST00000341947 CSPG5O95196 566 aa16.52■□□□□ 0.23
COL11A2-201ENST00000341947 KPNA2P52292 529 aaKnown RBP16.52■□□□□ 0.23
COL11A2-201ENST00000341947 DNAAF3Q8N9W5 541 aa16.52■□□□□ 0.23
COL11A2-201ENST00000341947 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.23
COL11A2-201ENST00000341947 PIGSQ96S52 555 aa16.52■□□□□ 0.23
COL11A2-201ENST00000341947 SMIM24O75264 130 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 INPP1P49441 399 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 GUCY2DQ02846 1103 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 TRIM42Q8IWZ5 723 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 EEF1GP26641 437 aaKnown RBP16.51■□□□□ 0.23
COL11A2-201ENST00000341947 DNAJC24Q6P3W2 148 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 CDR2Q01850 454 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 RASGRP4Q8TDF6 673 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 SPDL1Q96EA4 605 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 A0A1W2PQ27 194 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 A0A1W2PQ64 194 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 A0A1W2PQD8 194 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 WDR64B1ANS9 1081 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 C7orf31Q8N865 590 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 MRPL47Q9HD33 250 aaKnown RBP16.51■□□□□ 0.23
COL11A2-201ENST00000341947 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
COL11A2-201ENST00000341947 KDM5AP29375 1690 aaKnown RBP16.51■□□□□ 0.23
COL11A2-201ENST00000341947 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 SURF1Q15526 300 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 LRRC8AQ8IWT6 810 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 SGO2Q562F6 1265 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 F8W8V4 182 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 PPFIA2O75334 1257 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 CASP14P31944 242 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 DARS2Q6PI48 645 aaKnown RBP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 ANKRD13CQ8N6S4 541 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 ABT1Q9ULW3 272 aaKnown RBP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 PZPP20742 1482 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 NVLO15381 856 aaKnown RBP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 LRRC41Q15345 812 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 OR6B2Q6IFH4 312 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 NXF1Q9UBU9 619 aaKnown RBP16.5■□□□□ 0.23
COL11A2-201ENST00000341947 CAPN7Q9Y6W3 813 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
COL11A2-201ENST00000341947 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 CLIC2O15247 247 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 ELF1P32519 619 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 MAN2A1Q16706 1144 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 ARMCX2Q7L311 632 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 FAM160B2Q86V87 743 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 COBLO75128 1261 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 SLC39A14Q15043 492 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 MSH2P43246 934 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 ZNF658Q5TYW1 1059 aaPredicted RBP16.49■□□□□ 0.23
COL11A2-201ENST00000341947 PI4KBQ9UBF8 816 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 ECEL1O95672 775 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 SNX1Q13596 522 aa16.49■□□□□ 0.23
COL11A2-201ENST00000341947 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
COL11A2-201ENST00000341947 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
COL11A2-201ENST00000341947 MEIS1O00470 390 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 LRRN2O75325 713 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 RAD17O75943 681 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 EPHB1P54762 984 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 TLK1Q9UKI8 766 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 GNGT2O14610 69 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 ADD2P35612 726 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 SESN3P58005 492 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
COL11A2-201ENST00000341947 MAGED2Q9UNF1 606 aaPredicted RBP16.48■□□□□ 0.23
COL11A2-201ENST00000341947 PRPSAP2O60256 369 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 DYNLT1P63172 113 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 EEPD1Q7L9B9 569 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 ORC6Q9Y5N6 252 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 GSTA4O15217 222 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 SLC12A1Q13621 1099 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 GDAP1Q8TB36 358 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 UBE2TQ9NPD8 197 aaPredicted RBP16.48■□□□□ 0.23
COL11A2-201ENST00000341947 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 DBNLQ9UJU6 430 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms