RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 MTMR1Q13613 665 aa23.3■■□□□ 1.32
CLDND1-201ENST00000341181 JADE2Q9NQC1 790 aa23.3■■□□□ 1.32
CLDND1-201ENST00000341181 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
CLDND1-201ENST00000341181 GOLGA6L4A6NEF3 574 aa23.29■■□□□ 1.32
CLDND1-201ENST00000341181 POTEMA6NI47 508 aa23.29■■□□□ 1.32
CLDND1-201ENST00000341181 TECP42680 631 aa23.29■■□□□ 1.32
CLDND1-201ENST00000341181 SETQ01105 290 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-201ENST00000341181 DTHD1Q6ZMT9 781 aa23.29■■□□□ 1.32
CLDND1-201ENST00000341181 TTC12Q9H892 705 aaPredicted RBP23.29■■□□□ 1.32
CLDND1-201ENST00000341181 KIAA1217Q5T5P2 1943 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 CUTAO60888 179 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 LIG1P18858 919 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 SP3Q02447 781 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 PDE4DQ08499 809 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 STXBP2Q15833 593 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 XRRA1Q6P2D8 792 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 USP6NLQ92738 828 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 EPSTI1Q96J88 318 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 MAML3Q96JK9 1138 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 GJD2Q9UKL4 321 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 A0A1B0GVL5 298 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 FSD2A1L4K1 749 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 ARMCX2Q7L311 632 aa23.28■■□□□ 1.32
CLDND1-201ENST00000341181 ATP9AO75110 1047 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 MAP2K5Q13163 448 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 ITGB3BPQ13352 177 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-201ENST00000341181 FBXO16Q8IX29 292 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-201ENST00000341181 FSIP1Q8NA03 581 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 ZNF577Q9BSK1 485 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 IPO5O00410 1097 aaKnown RBP23.27■■□□□ 1.32
CLDND1-201ENST00000341181 RESP18Q5W5W9 173 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 NIPA1Q7RTP0 329 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 SYMPKQ92797 1274 aaKnown RBP23.27■■□□□ 1.32
CLDND1-201ENST00000341181 BCAS3Q9H6U6 928 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 FLRT1Q9NZU1 646 aa23.27■■□□□ 1.32
CLDND1-201ENST00000341181 A0A1W2PQ27 194 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 A0A1W2PQ64 194 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 A0A1W2PQD8 194 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 MARCH6O60337 910 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 EIF3JO75822 258 aaKnown RBP23.26■■□□□ 1.31
CLDND1-201ENST00000341181 FCGRTP55899 365 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 SPIRE1Q08AE8 756 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 CCL14Q16627 93 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 SEPT14Q6ZU15 432 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 IGSF22Q8N9C0 903 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 MRPS27Q92552 414 aaKnown RBP23.26■■□□□ 1.31
CLDND1-201ENST00000341181 SLC5A5Q92911 643 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 NUDT12Q9BQG2 462 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 AGO4Q9HCK5 861 aaKnown RBP23.26■■□□□ 1.31
CLDND1-201ENST00000341181 VAV3Q9UKW4 847 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 GABRQQ9UN88 632 aa23.26■■□□□ 1.31
CLDND1-201ENST00000341181 GOLGA6L3A6NEY3 463 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 GPR25O00155 361 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 TBX3O15119 743 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 CYP2B6P20813 491 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 FXR2P51116 673 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLDND1-201ENST00000341181 NDUFA8P51970 172 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 DNAJC5GQ8N7S2 189 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 PCDHA12Q9UN75 941 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 PFKFB1P16118 471 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 CMA1P23946 247 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 LRCH2Q5VUJ6 765 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 ZNF579Q8NAF0 562 aaKnown RBP23.25■■□□□ 1.31
CLDND1-201ENST00000341181 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 GPRASP2Q96D09 838 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 FAM20AQ96MK3 541 aa23.25■■□□□ 1.31
CLDND1-201ENST00000341181 DDX39AO00148 427 aaKnown RBP23.24■■□□□ 1.31
CLDND1-201ENST00000341181 NR1I2O75469 434 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 PSMD10O75832 226 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 MBD3O95983 291 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 SP2Q02086 613 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 SLFN12Q8IYM2 578 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 SOCS4Q8WXH5 440 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 DOCK5Q9H7D0 1870 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 A0A087X0B3 334 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 DHX15O43143 795 aaKnown RBP23.24■■□□□ 1.31
CLDND1-201ENST00000341181 STAM2O75886 525 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 HOXC6P09630 235 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 LONP1P36776 959 aaKnown RBP23.24■■□□□ 1.31
CLDND1-201ENST00000341181 PRKCZQ05513 592 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 ZNF467Q7Z7K2 595 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-201ENST00000341181 SAGE1Q9NXZ1 904 aa23.24■■□□□ 1.31
CLDND1-201ENST00000341181 DIS3Q9Y2L1 958 aaKnown RBP23.24■■□□□ 1.31
CLDND1-201ENST00000341181 SYCE3A1L190 88 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 ASB14A6NK59 587 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 SORBS3O60504 671 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 GNPTABQ3T906 1256 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 TMEM63BQ5T3F8 832 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 MAMDC4Q6UXC1 1216 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 APBA2Q99767 749 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 TINF2Q9BSI4 451 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 PDGFCQ9NRA1 345 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 TELO2Q9Y4R8 837 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 CHMP2AO43633 222 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 GAS7O60861 476 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 ARIH2O95376 493 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 SNAI1O95863 264 aaPredicted RBP23.23■■□□□ 1.31
CLDND1-201ENST00000341181 KCNA2P16389 499 aa23.23■■□□□ 1.31
CLDND1-201ENST00000341181 PTGS1P23219 599 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms