RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PPANQ9NQ55 473 aaKnown RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 CTNNA1P35221 906 aaKnown RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PDXDC1Q6P996 788 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 ARHGAP27Q6ZUM4 889 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 AENQ8WTP8 325 aaKnown RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PANK4Q9NVE7 773 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 TBC1D7Q9P0N9 293 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 CEP72Q9P209 647 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 ZNF804BA4D1E1 1349 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 FAM205AQ6ZU69 1335 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PDE2AO00408 941 aaPredicted RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PLEKP08567 350 aaPredicted RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PEX26Q7Z412 305 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 DAGLBQ8NCG7 672 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 TMEM47Q9BQJ4 181 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 KDM3AQ9Y4C1 1321 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 PALMO75781 387 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 SLC1A4P43007 532 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 SEPT2Q15019 361 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 IL17AQ16552 155 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 COL5A2P05997 1499 aaPredicted RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 GRID2IPA4D2P6 1211 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 SMIM22K7EJ46 135 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 ATP2C2O75185 946 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 TBCAO75347 108 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 NTSR2O95665 410 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 CCDC172P0C7W6 258 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 RPL13P26373 211 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 RBM12Q9NTZ6 932 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 hCG_1984214I3L0E3 225 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 MPHOSPH10O00566 681 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 MAP2K2P36507 400 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 C12orf60Q5U649 245 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 CLEC4GQ6UXB4 293 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 CREG2Q8IUH2 290 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 ZNF713Q8N859 430 aaPredicted RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 ARHGAP20Q9P2F6 1191 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 RGPD5Q99666 1765 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 KCPQ6ZWJ8 1503 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 ABCB11O95342 1321 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 ESYT3A0FGR9 886 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 STXBP3O00186 592 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 KLRC4O43908 158 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 PRPF6O94906 941 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 CAMTA2O94983 1202 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 KRT71Q3SY84 523 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 DCAF17Q5H9S7 520 aaPredicted RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 SYCE1Q8N0S2 351 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 SMARCAL1Q9NZC9 954 aa10.36□□□□□ -0.75
TRERF1-201ENST00000340840 UTP11Q9Y3A2 253 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
TRERF1-201ENST00000340840 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 NF2P35240 595 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 IFT88Q13099 833 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 USP17L2Q6R6M4 530 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 MARCH10Q8NA82 808 aaPredicted RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 DDX12PQ92771 950 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 PBKQ96KB5 322 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ZIM3Q96PE6 472 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 PIGSQ96S52 555 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 SPZ1Q9BXG8 430 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ARMCX3Q9UH62 379 aaPredicted RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 SWAP70Q9UH65 585 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ADAMTS1Q9UHI8 967 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 PCDHA12Q9UN75 941 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 KRIT1O00522 736 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 MYBL2P10244 700 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ZNF76P36508 570 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ADAM9Q13443 819 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 NPY5RQ15761 445 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 CENPPQ6IPU0 288 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 SH2D3CQ8N5H7 860 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 NAP1L3Q99457 506 aaPredicted RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 TAOK3Q9H2K8 898 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 RASAL2Q9UJF2 1139 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 H2AFZP0C0S5 128 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 EZRP15311 586 aaKnown RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 IBSPP21815 317 aaPredicted RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 CUL1Q13616 776 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 C10orf76Q5T2E6 689 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 HAUS3Q68CZ6 603 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 ILDR2Q71H61 639 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 H2AFVQ71UI9 128 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 TAX1BP1Q86VP1 789 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 GPBP1Q86WP2 473 aa10.35□□□□□ -0.75
TRERF1-201ENST00000340840 CELF1Q92879 486 aaKnown RBP10.35□□□□□ -0.75
TRERF1-201ENST00000340840 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms