RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 LPIN2Q92539 896 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 CDK15Q96Q40 435 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 ABCF2Q9UG63 623 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 GRM6O15303 877 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 CSPG5O95196 566 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-201ENST00000340660 PHKA1P46020 1223 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 SHC2P98077 582 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 LMNB2Q03252 620 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
ATXN3-201ENST00000340660 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 FGD4Q96M96 766 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 BARX2Q9UMQ3 279 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-201ENST00000340660 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
ATXN3-201ENST00000340660 USP9XQ93008 2570 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-201ENST00000340660 DNAJC25-GNG10A0A024R161 153 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 GRM8O00222 908 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 ADH1CP00326 375 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 NPR3P17342 541 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 FLIIQ13045 1269 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
ATXN3-201ENST00000340660 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
ATXN3-201ENST00000340660 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 FAM117AQ9C073 453 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 PALD1Q9ULE6 856 aa13.77□□□□□ -0.21
ATXN3-201ENST00000340660 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 ZEB2O60315 1214 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 NBNO60934 754 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 GLP2RO95838 553 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 CXCL10P02778 98 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 C1QTNF9P0C862 333 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
ATXN3-201ENST00000340660 BFSP2Q13515 415 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
ATXN3-201ENST00000340660 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
ATXN3-201ENST00000340660 BPHLQ86WA6 291 aaPredicted RBP13.76□□□□□ -0.21
ATXN3-201ENST00000340660 STK31Q9BXU1 1019 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 LMAN2LQ9H0V9 348 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
ATXN3-201ENST00000340660 MCM3APO60318 1980 aa13.76□□□□□ -0.21
ATXN3-201ENST00000340660 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 FLOT1O75955 427 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 WFS1O76024 890 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 GUCY1A2P33402 732 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
ATXN3-201ENST00000340660 SOWAHCQ53LP3 525 aaPredicted RBP13.75□□□□□ -0.21
ATXN3-201ENST00000340660 PRR23BQ6ZRT6 265 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 ARMCX2Q7L311 632 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 GPR161Q8N6U8 529 aaKnown RBP13.75□□□□□ -0.21
ATXN3-201ENST00000340660 MAGEB6Q8N7X4 407 aa13.75□□□□□ -0.21
ATXN3-201ENST00000340660 KLF16Q9BXK1 252 aaPredicted RBP13.75□□□□□ -0.21
ATXN3-201ENST00000340660 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 FLT1P17948 1338 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
ATXN3-201ENST00000340660 TIMP2P16035 220 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 TGM1P22735 817 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 AGERQ15109 404 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 TATDN1Q6P1N9 297 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 ZC3H14Q6PJT7 736 aaKnown RBP13.74□□□□□ -0.21
ATXN3-201ENST00000340660 ADGRD2Q7Z7M1 963 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 MAPKAPK5Q8IW41 473 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 KDF1Q8NAX2 398 aaPredicted RBP13.74□□□□□ -0.21
ATXN3-201ENST00000340660 ARMC2Q8NEN0 867 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 IGSF10Q6WRI0 2623 aa13.74□□□□□ -0.21
ATXN3-201ENST00000340660 STAT3P40763 770 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 CAMK1Q14012 370 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATXN3-201ENST00000340660 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 ADAMTS5Q9UNA0 930 aa13.73□□□□□ -0.21
ATXN3-201ENST00000340660 PARP14Q460N5 1801 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 C5orf67F2Z3F1 127 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 F6X3S4 739 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 EFCAB14O75071 495 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 LGR5O75473 907 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 SP9P0CG40 484 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 IKBKEQ14164 716 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 ARID5BQ14865 1188 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
ATXN3-201ENST00000340660 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms