RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 ZNF570Q96NI8 536 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 RBM12Q9NTZ6 932 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 ANKRD31Q8N7Z5 1873 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 ZBTB43O43298 467 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 STAMQ92783 540 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 GSDMAQ96QA5 445 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 CYP2D7A0A087X1C5 515 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 CAND2O75155 1236 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 SPAG1Q07617 926 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 TRAF1Q13077 416 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 C3orf20Q8ND61 904 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 C1orf131Q8NDD1 294 aaKnown RBP16.92■□□□□ 0.3
LIMK2-203ENST00000340552 IFT81Q8WYA0 676 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 CD209Q9NNX6 404 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 SLC12A6Q9UHW9 1150 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 CAPN11Q9UMQ6 739 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 C5orf60A6NFR6 353 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 TMOD1P28289 359 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 CYLC1P35663 651 aaPredicted RBP16.92■□□□□ 0.3
LIMK2-203ENST00000340552 PPP1R7Q15435 360 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 MEA1Q16626 185 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
LIMK2-203ENST00000340552 MREGQ8N565 214 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 MYL10Q9BUA6 226 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 YIPF3Q9GZM5 350 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 NHEJ1Q9H9Q4 299 aaPredicted RBP16.92■□□□□ 0.3
LIMK2-203ENST00000340552 GDF3Q9NR23 364 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 KCNJ14Q9UNX9 436 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
LIMK2-203ENST00000340552 ERICH2A1L162 156 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 DIS3L2Q8IYB7 885 aaKnown RBP16.91■□□□□ 0.3
LIMK2-203ENST00000340552 TBC1D16Q8TBP0 767 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 TMBIM4Q9HC24 238 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 USP17L21D6R901 530 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 WTAPQ15007 396 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 CCDC181Q5TID7 509 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 MAATS1Q7Z4T9 603 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 ESR2Q92731 530 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 EPB41L5Q9HCM4 733 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
LIMK2-203ENST00000340552 LRWD1Q9UFC0 647 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 PLAAQ9Y263 795 aa16.91■□□□□ 0.3
LIMK2-203ENST00000340552 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-203ENST00000340552 ZNF263O14978 683 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 MMP10P09238 476 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 CRELD2Q6UXH1 353 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-203ENST00000340552 TAX1BP1Q86VP1 789 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-203ENST00000340552 AGPAT5Q9NUQ2 364 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 RWDD2AQ9UIY3 292 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 GHRP10912 638 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 PRLRP16471 622 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 GRIK5Q16478 980 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 RILPL1Q5EBL4 403 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 ARFGAP2Q8N6H7 521 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 TRIM58Q8NG06 486 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 KDM4CQ9H3R0 1056 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 ATP8A2Q9NTI2 1148 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.9■□□□□ 0.3
LIMK2-203ENST00000340552 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
LIMK2-203ENST00000340552 C6orf229H3BNL8 230 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.3
LIMK2-203ENST00000340552 MMP1P03956 469 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 GUCY1A2P33402 732 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.3
LIMK2-203ENST00000340552 GUCY2DQ02846 1103 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 PAK2Q13177 524 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 NR5A1Q13285 461 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.3
LIMK2-203ENST00000340552 SP8Q8IXZ3 490 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 UBAC1Q9BSL1 405 aa16.89■□□□□ 0.3
LIMK2-203ENST00000340552 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.3
LIMK2-203ENST00000340552 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
LIMK2-203ENST00000340552 NCK2O43639 380 aa16.89■□□□□ 0.29
LIMK2-203ENST00000340552 HEXIM1O94992 359 aaKnown RBP16.89■□□□□ 0.29
LIMK2-203ENST00000340552 MOCS3O95396 460 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms