RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ERICH1Q86X53 443 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 SPICE1Q8N0Z3 855 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 ZNF570Q96NI8 536 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 IFIH1Q9BYX4 1025 aaKnown RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 LACRTQ9GZZ8 138 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 TAF1DQ9H5J8 278 aaPredicted RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 LRWD1Q9UFC0 647 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 SCOCQ9UIL1 159 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 SLC12A7Q9Y666 1083 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 ZSCAN5CA6NGD5 496 aaPredicted RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 BUB1O43683 1085 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 EPB41P11171 864 aaKnown RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 BCAMP50895 628 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 CRACR2BQ8N4Y2 399 aaPredicted RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 RAPGEF5Q92565 580 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 TRIM31Q9BZY9 425 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 A0A1B0GVG6 124 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 NCK2O43639 380 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 CSF1RP07333 972 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 FAM153BP0C7A2 387 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 RAD23BP54727 409 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 BLMHQ13867 455 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 FAM153CQ494X1 144 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 SMIM5Q71RC9 77 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 MDM1Q8TC05 714 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 MGARPQ8TDB4 240 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 CHMP6Q96FZ7 201 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 RBM41Q96IZ5 413 aaKnown RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 DDX23Q9BUQ8 820 aaKnown RBP10.18□□□□□ -0.78
RPGR-202ENST00000339363 FAM153AQ9UHL3 310 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 COL18A1P39060 1754 aa10.18□□□□□ -0.78
RPGR-202ENST00000339363 KCNJ18B7U540 433 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 IGF2BP3O00425 579 aaKnown RBP eCLIP10.17□□□□□ -0.78
RPGR-202ENST00000339363 GCLCP48506 637 aaPredicted RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 SSRP1Q08945 709 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 IFIT5Q13325 482 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 KCNJ12Q14500 433 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 WDR59Q6PJI9 974 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 SGMS1Q86VZ5 419 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 MAIP1Q8WWC4 291 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 ACSBG1Q96GR2 724 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 ECT2Q9H8V3 914 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 TTC26A0AVF1 554 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 DNAJC8O75937 253 aaPredicted RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 RNF8O76064 485 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 ALDH3A1P30838 453 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 MTIF2P46199 727 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 KLC1Q07866 573 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 SDCCAG8Q86SQ7 713 aaPredicted RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 MLXIPQ9HAP2 919 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 VCX3AQ9NNX9 186 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 MYH7P12883 1935 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 ZNF189O75820 626 aaPredicted RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 PARP1P09874 1014 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 LINGO3P0C6S8 592 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 TNNC1P63316 161 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 MRPS35P82673 323 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 DEUP1Q05D60 604 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 CRELD2Q6UXH1 353 aaPredicted RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 CCDC155Q8N6L0 562 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 PIDD1Q9HB75 910 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 RBM12Q9NTZ6 932 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 SNX12Q9UMY4 172 aa10.17□□□□□ -0.78
RPGR-202ENST00000339363 SRPRBQ9Y5M8 271 aaKnown RBP10.17□□□□□ -0.78
RPGR-202ENST00000339363 PLEKP08567 350 aaPredicted RBP10.16□□□□□ -0.78
RPGR-202ENST00000339363 HERVK_113P62684 666 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 FUT2Q10981 343 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 IFI16Q16666 785 aaKnown RBP10.16□□□□□ -0.78
RPGR-202ENST00000339363 PTPROQ16827 1216 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 TRIML1Q8N9V2 468 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 RASGRP4Q8TDF6 673 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 HPS3Q969F9 1004 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 MS4A14Q96JA4 679 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 LBHD1Q9BQE6 289 aaPredicted RBP10.16□□□□□ -0.78
RPGR-202ENST00000339363 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 EBF2Q9HAK2 575 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 AGPAT5Q9NUQ2 364 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 LRP6O75581 1613 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 ANO9A1A5B4 782 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
RPGR-202ENST00000339363 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
RPGR-202ENST00000339363 MMEP08473 750 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 IFNAR1P17181 557 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 POLD1P28340 1107 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 RFC5P40937 340 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 KCNJ2P63252 427 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 SEPT2Q15019 361 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
RPGR-202ENST00000339363 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms