RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TEX33O43247 280 aa25.07■■□□□ 1.6
PDLIM2-203ENST00000339162 ZBED4O75132 1171 aa25.07■■□□□ 1.6
PDLIM2-203ENST00000339162 GSDMDP57764 484 aa25.07■■□□□ 1.6
PDLIM2-203ENST00000339162 CEP55Q53EZ4 464 aa25.07■■□□□ 1.6
PDLIM2-203ENST00000339162 EML1O00423 815 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 CHMP2AO43633 222 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 SKILP12757 684 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 PSMC6P62333 389 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 CCZ1BP86790 482 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 CCZ1P86791 482 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 RAD51AP2Q09MP3 1159 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 STIM1Q13586 685 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 UNC13DQ70J99 1090 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 SULF1Q8IWU6 871 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 IL31RAQ8NI17 732 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 EHMT1Q9H9B1 1298 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 RIPK3Q9Y572 518 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 PSMA7O14818 248 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 PLA2G4BP0C869 781 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 SPATA31C1P0DKV0 1188 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 ARP10275 920 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 CACNB1Q02641 598 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 NR1I3Q14994 352 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 HAUS3Q68CZ6 603 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 PITPNM2Q9BZ72 1349 aa25.06■■□□□ 1.6
PDLIM2-203ENST00000339162 NPHP3-ACAD11A0A0J9YXS1 232 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 A0A1B0GTH6 734 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 VGLL4Q14135 290 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 TEX2Q8IWB9 1127 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 CNKSR2Q8WXI2 1034 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 TRERF1Q96PN7 1200 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 PURBQ96QR8 312 aaKnown RBP25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 LRCH2Q5VUJ6 765 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 CNNM4Q6P4Q7 775 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 ERMNQ8TAM6 284 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 RGL1Q9NZL6 768 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 AFG3L2Q9Y4W6 797 aa25.05■■□□□ 1.6
PDLIM2-203ENST00000339162 SFPQP23246 707 aaKnown RBP eCLIP25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 RPS6P62753 249 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 MCF2L2Q86YR7 1114 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 GLIS3Q8NEA6 775 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 DNAJC19Q96DA6 116 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 TRIM47Q96LD4 638 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 PKD2L1Q9P0L9 805 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 ADD3Q9UEY8 706 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 PVALEFA0A1B0GWK0 134 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 RPA1P27694 616 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 KRT31Q15323 416 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 OTOP1Q7RTM1 612 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 KRT26Q7Z3Y9 468 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 SYTL5Q8TDW5 730 aaPredicted RBP25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 SNCAIPQ9Y6H5 919 aa25.04■■□□□ 1.6
PDLIM2-203ENST00000339162 KCNJ18B7U540 433 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 C19orf81C9J6K1 198 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 PSMD10O75832 226 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 ITGB5P18084 799 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 SEMA3FQ13275 785 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 KCNJ12Q14500 433 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 NOL9Q5SY16 702 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 TTI2Q6NXR4 508 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 NSMFQ6X4W1 530 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 GPBP1Q86WP2 473 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 IRF2BP1Q8IU81 584 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 C12orf42Q96LP6 360 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 TAAR1Q96RJ0 339 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 EIF2AK1Q9BQI3 630 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 ZNF577Q9BSK1 485 aa25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 SRRTQ9BXP5 876 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-203ENST00000339162 OFD1O75665 1012 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 ANKRD40Q6AI12 368 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 SLC5A5Q92911 643 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 DHTKD1Q96HY7 919 aaPredicted RBP25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 LRRC27Q9C0I9 530 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 VPS16Q9H269 839 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 SPTLC3Q9NUV7 552 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 TAB2Q9NYJ8 693 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 TMOD4Q9NZQ9 345 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 PHIPQ8WWQ0 1821 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 EIF2AK2P19525 551 aaKnown RBP25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 LRRC41Q15345 812 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 TCP11X2Q5H9J9 407 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 CCDC150Q8NCX0 1101 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 P2RX5Q93086 422 aa25.02■■□□□ 1.6
PDLIM2-203ENST00000339162 GAS7O60861 476 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 MAP3K9P80192 1104 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 CTTNQ14247 550 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 SPECC1LQ69YQ0 1117 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 SNRNP48Q6IEG0 339 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 DUSP9Q99956 384 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 MXRA8Q9BRK3 442 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 WDR11Q9BZH6 1224 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 TBC1D7Q9P0N9 293 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 CYP11B2P19099 503 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 DSG3P32926 999 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 SLC12A3P55017 1021 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 COG2Q14746 738 aa25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 DNTTIP2Q5QJE6 756 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-203ENST00000339162 MOB2Q70IA6 237 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms