RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
MUC1-202ENST00000338684 ABCB11O95342 1321 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
MUC1-202ENST00000338684 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
MUC1-202ENST00000338684 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 MTIF3Q9H2K0 278 aaKnown RBP17.21■□□□□ 0.35
MUC1-202ENST00000338684 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 CHD7Q9P2D1 2997 aa17.21■□□□□ 0.35
MUC1-202ENST00000338684 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 ZBBXA8MT70 800 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 KPNA6O60684 536 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 PPP1R11O60927 126 aaPredicted RBP17.2■□□□□ 0.34
MUC1-202ENST00000338684 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 BRDTQ58F21 947 aaPredicted RBP17.2■□□□□ 0.34
MUC1-202ENST00000338684 FBXO11Q86XK2 927 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
MUC1-202ENST00000338684 KAT2BQ92831 832 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
MUC1-202ENST00000338684 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 LIMCH1Q9UPQ0 1083 aa17.2■□□□□ 0.34
MUC1-202ENST00000338684 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 MUC3AQ02505 3323 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 B4DLN1 442 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 MMP3P08254 477 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 GPNMBQ14956 572 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 CCDC85BQ15834 202 aaPredicted RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 MAF1Q9H063 256 aa17.19■□□□□ 0.34
MUC1-202ENST00000338684 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 DDX41Q9UJV9 622 aaKnown RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
MUC1-202ENST00000338684 KIAA1217Q5T5P2 1943 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 TTC28Q96AY4 2481 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 ZBTB5O15062 677 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CYTH3O43739 400 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 PFKFB2O60825 505 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CFBP00751 764 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 GH1P01241 217 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 IGFBP4P22692 258 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CDC27P30260 824 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 MCM2P49736 904 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CCT2P78371 535 aaKnown RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 TRAF1Q13077 416 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 STXBP2Q15833 593 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 MCF2L2Q86YR7 1114 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 SRBD1Q8N5C6 995 aaKnown RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 RRP36Q96EU6 259 aaKnown RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 ZSCAN31Q96LW9 406 aaPredicted RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 FAM217BQ9NTX9 383 aaPredicted RBP17.18■□□□□ 0.34
MUC1-202ENST00000338684 PCDHA11Q9Y5I1 949 aa17.18■□□□□ 0.34
MUC1-202ENST00000338684 CPLX1O14810 134 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 RGS20O76081 388 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 NR3C2P08235 984 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 ADD1P35611 737 aaKnown RBP17.17■□□□□ 0.34
MUC1-202ENST00000338684 HSD17B4P51659 736 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 STK3Q13188 491 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 PTGISQ16647 500 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 ARHGEF16Q5VV41 709 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
MUC1-202ENST00000338684 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
MUC1-202ENST00000338684 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
MUC1-202ENST00000338684 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
MUC1-202ENST00000338684 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
MUC1-202ENST00000338684 PNMA6FA0A0J9YX94 578 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 RFXAPO00287 272 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 PITPNM1O00562 1244 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
MUC1-202ENST00000338684 PFKMP08237 780 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 GHRHRQ02643 423 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 ME3Q16798 604 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 PPP2R2DQ66LE6 453 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
MUC1-202ENST00000338684 PIGSQ96S52 555 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
MUC1-202ENST00000338684 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
MUC1-202ENST00000338684 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
MUC1-202ENST00000338684 CDKL5O76039 1030 aa17.15■□□□□ 0.34
MUC1-202ENST00000338684 CA3P07451 260 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms