RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 PKN1Q16512 942 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 DGKDQ16760 1214 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 COPS5Q92905 334 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 EMID1Q96A84 441 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 TOX2Q96NM4 488 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 INPP4AQ96PE3 977 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
SLC28A1-202ENST00000338602 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 MAFGO15525 162 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 RGS20O76081 388 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 GGPS1O95749 300 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 CLTBP09497 229 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ZNF76P36508 570 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ARHGAP1Q07960 439 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 SCRN1Q12765 414 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ANKRD33Q7Z3H0 272 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 REXO1Q8N1G1 1221 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 WASF1Q92558 559 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 ANO3Q9BYT9 981 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 NOP56O00567 594 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 MMP3P08254 477 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 SYN1P17600 705 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 PTGS1P23219 599 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 CDK7P50613 346 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 JAKMIP3Q5VZ66 844 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 SENP7Q9BQF6 1050 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
SLC28A1-202ENST00000338602 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 KIAA1217Q5T5P2 1943 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 SUPT20HL2P0C7V6 817 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 SREBF1P36956 1147 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 CLK2P49760 499 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 MTMR1Q13613 665 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
SLC28A1-202ENST00000338602 ST18O60284 1047 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 RAG1P15918 1043 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 PTPN11Q06124 597 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 RABEP1Q15276 862 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 CEP55Q53EZ4 464 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 GTF3C6Q969F1 213 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 COL25A1Q9BXS0 654 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 PDLIM7Q9NR12 457 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-202ENST00000338602 ALPK3Q96L96 1907 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 ITGB5P18084 799 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 PSMC6P62333 389 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 ARHGAP4P98171 946 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 SP2Q02086 613 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 ME3Q16798 604 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 CYFIP1Q7L576 1253 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 SDF4Q9BRK5 362 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 PCDHA4Q9UN74 947 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
SLC28A1-202ENST00000338602 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 SORBS3O60504 671 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 BMP8BP34820 402 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 SEMA3FQ13275 785 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 TRIM29Q14134 588 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 NBPF20Q3BBV1 942 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
SLC28A1-202ENST00000338602 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms