RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ANAPC15P60006 121 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
PRKN-201ENST00000338468 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
PRKN-201ENST00000338468 PCNX4Q63HM2 1172 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 PPP1R18Q6NYC8 613 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 MYLIPQ8WY64 445 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 BCAS3Q9H6U6 928 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 RIC8AQ9NPQ8 531 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
PRKN-201ENST00000338468 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 ADAMTS3O15072 1205 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
PRKN-201ENST00000338468 PPFIA3O75145 1194 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 FOSL2P15408 326 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 UBA1P22314 1058 aaKnown RBP17.53■□□□□ 0.4
PRKN-201ENST00000338468 ICAM3P32942 547 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 NAPAP54920 295 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 PHKBQ93100 1093 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 MTG1Q9BT17 334 aaPredicted RBP17.53■□□□□ 0.4
PRKN-201ENST00000338468 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 RTEL1Q9NZ71 1219 aa17.53■□□□□ 0.4
PRKN-201ENST00000338468 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 SPATA31C2B4DYI2 1134 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 hCG_1984214I3L0E3 225 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 STAM2O75886 525 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 TGFB3P10600 412 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 SCG2P13521 617 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 IFNAR1P17181 557 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.4
PRKN-201ENST00000338468 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 ZNF713Q8N859 430 aaPredicted RBP17.52■□□□□ 0.4
PRKN-201ENST00000338468 PPP1R13LQ8WUF5 828 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 SYMPKQ92797 1274 aaKnown RBP17.52■□□□□ 0.4
PRKN-201ENST00000338468 KAT2BQ92831 832 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
PRKN-201ENST00000338468 TTYH1Q9H313 450 aaPredicted RBP17.52■□□□□ 0.4
PRKN-201ENST00000338468 PRDM6Q9NQX0 595 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
PRKN-201ENST00000338468 MYH7BA7E2Y1 1941 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 TMEM265A0A087WTH1 108 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 SORBS3O60504 671 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 KPNA6O60684 536 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 GGPS1O95749 300 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
PRKN-201ENST00000338468 CLK2P49760 499 aaKnown RBP17.51■□□□□ 0.39
PRKN-201ENST00000338468 ADCY7P51828 1080 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 BRDTQ58F21 947 aaPredicted RBP17.51■□□□□ 0.39
PRKN-201ENST00000338468 DHX37Q8IY37 1157 aaKnown RBP17.51■□□□□ 0.39
PRKN-201ENST00000338468 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 TRPV6Q9H1D0 765 aa17.51■□□□□ 0.39
PRKN-201ENST00000338468 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
PRKN-201ENST00000338468 B4GALT4O60513 344 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 ITGB5P18084 799 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 EPHB4P54760 987 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 GNPTABQ3T906 1256 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 TEX2Q8IWB9 1127 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 PGBD1Q96JS3 809 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 RNPC3Q96LT9 517 aaKnown RBP17.5■□□□□ 0.39
PRKN-201ENST00000338468 RNF26Q9BY78 433 aaPredicted RBP17.5■□□□□ 0.39
PRKN-201ENST00000338468 SEZ6LQ9BYH1 1024 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 TELO2Q9Y4R8 837 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 UBIAD1Q9Y5Z9 338 aa17.5■□□□□ 0.39
PRKN-201ENST00000338468 ESYT2A0FGR8 921 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 SPDYE3A6NKU9 549 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 FIBPO43427 364 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 TIMP1P01033 207 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 RAG1P15918 1043 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 DGKDQ16760 1214 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 SLC26A6Q9BXS9 759 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
PRKN-201ENST00000338468 TPCN1Q9ULQ1 816 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 DOCK5Q9H7D0 1870 aa17.49■□□□□ 0.39
PRKN-201ENST00000338468 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
PRKN-201ENST00000338468 ATP9AO75110 1047 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 STK3Q13188 491 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 GPRASP2Q96D09 838 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 ANO3Q9BYT9 981 aa17.48■□□□□ 0.39
PRKN-201ENST00000338468 UMODL1Q5DID0 1318 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 HAS3O00219 553 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 PPFIA4O75335 1185 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 F2P00734 622 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 KCNA2P16389 499 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 AK2P54819 239 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 SCRN1Q12765 414 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 METTL7BQ6UX53 244 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 CYP2W1Q8TAV3 490 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms