RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 RESP18Q5W5W9 173 aa10.28□□□□□ -0.76
FNDC3B-201ENST00000336824 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
FNDC3B-201ENST00000336824 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
FNDC3B-201ENST00000336824 SYNPO2Q9UMS6 1093 aa10.28□□□□□ -0.76
FNDC3B-201ENST00000336824 ATF7P17544 494 aaPredicted RBP10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 SEMA3FQ13275 785 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 MAP9Q49MG5 647 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 CCDC186Q7Z3E2 898 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 ACCSQ96QU6 501 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 GBA2Q9HCG7 927 aaPredicted RBP10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 MYH7P12883 1935 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 GAKO14976 1311 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 UBXN4Q92575 508 aa10.27□□□□□ -0.76
FNDC3B-201ENST00000336824 GOLGA6L10A0A0M3HER8 536 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 CYP2J2P51589 502 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 URI1O94763 535 aaPredicted RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 TNNT1P13805 278 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 PTGS1P23219 599 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 ASIC2Q16515 512 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 GPRC5AQ8NFJ5 357 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 GPRC5DQ9NZD1 345 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 TMEM63CQ9P1W3 806 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 CICQ96RK0 1608 aaPredicted RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 DUOX1Q9NRD9 1551 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 IPO5O00410 1097 aaKnown RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 PTPREP23469 700 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 ZNF658Q5TYW1 1059 aaPredicted RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 TNPO2O14787 897 aaKnown RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 HNRNPDLO14979 420 aaKnown RBP10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 JADE2Q9NQC1 790 aa10.27□□□□□ -0.77
FNDC3B-201ENST00000336824 STAM2O75886 525 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 ERCC5P28715 1186 aaPredicted RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 CKAP4Q07065 602 aaKnown RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 ANTXR2P58335 489 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 SPATA1Q5VX52 437 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 APOBEC3HQ6NTF7 200 aaKnown RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 CYP26C1Q6V0L0 522 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 LRRC45Q96CN5 670 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 SLC39A2Q9NP94 309 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 KCNJ18B7U540 433 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 GCLCP48506 637 aaPredicted RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 KCNJ12Q14500 433 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 CEP55Q53EZ4 464 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 FAM81BQ96LP2 452 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 BAG1Q99933 345 aaPredicted RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 MAFGO15525 162 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 TMX2Q9Y320 296 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 PRAMEF18Q5VWM3 479 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 ADGRA1Q86SQ6 560 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 CTNNBL1Q8WYA6 563 aaPredicted RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 KIF2CQ99661 725 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 MAD2L2Q9UI95 211 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 ESYT2A0FGR8 921 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 NPM3O75607 178 aaKnown RBP10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 NHSQ6T4R5 1651 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 KCNH4Q9UQ05 1017 aa10.26□□□□□ -0.77
FNDC3B-201ENST00000336824 EIF3JO75822 258 aaKnown RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 MTERF2Q49AM1 385 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 GOLGA1Q92805 767 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 RPS6KC1Q96S38 1066 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 PRKAG2Q9UGJ0 569 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 KRT19P08727 400 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 GNG11P61952 73 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 FBXL16Q8N461 479 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 C16orf45Q96MC5 204 aaPredicted RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ZMYND12Q9H0C1 365 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ICAM1P05362 532 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ACTN2P35609 894 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 PRPF4BQ13523 1007 aaKnown RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 TNFAIP3P21580 790 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 QARSP47897 775 aaKnown RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ADAM9Q13443 819 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 GBP6Q6ZN66 633 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 GPT2Q8TD30 523 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 RRAGCQ9HB90 399 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 INO80B-WBP1J3KQ70 363 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 STXBP3O00186 592 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 LPXNO60711 386 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ATP2C1P98194 919 aaPredicted RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ANKFY1Q9P2R3 1169 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 CXCL11O14625 94 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 TBX3O15119 743 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 U2AF2P26368 475 aaKnown RBP eCLIP10.25□□□□□ -0.778e-8■■□□□ 14.5
FNDC3B-201ENST00000336824 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 CTAGE9A4FU28 777 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 TROAPQ12815 778 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 SURF1Q15526 300 aa10.25□□□□□ -0.77
FNDC3B-201ENST00000336824 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms