RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NUDT12Q9BQG2 462 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 KCNH7Q9NS40 1196 aa24.35■■□□□ 1.49
TPM1-204ENST00000334895 DDX11L8A8MPP1 907 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 EIF3JO75822 258 aaKnown RBP24.34■■□□□ 1.49
TPM1-204ENST00000334895 PDE4DQ08499 809 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 SEMA3FQ13275 785 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 SOCS4Q8WXH5 440 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 FERMT2Q96AC1 680 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 PRDM10Q9NQV6 1147 aa24.34■■□□□ 1.49
TPM1-204ENST00000334895 VWA3AA6NCI4 1184 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 TBX3O15119 743 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 CUTAO60888 179 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 STAM2O75886 525 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 TXKP42681 527 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 MTMR1Q13613 665 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 TPRNQ4KMQ1 711 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 ADALQ6DHV7 355 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 MAMDC4Q6UXC1 1216 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 ARMCX2Q7L311 632 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 CD99L2Q8TCZ2 262 aa24.33■■□□□ 1.49
TPM1-204ENST00000334895 ASB14A6NK59 587 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 SHC4Q6S5L8 630 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 DTHD1Q6ZMT9 781 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 SLC5A5Q92911 643 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 GPRASP2Q96D09 838 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 CSRNP2Q9H175 543 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 AGO4Q9HCK5 861 aaKnown RBP24.32■■□□□ 1.48
TPM1-204ENST00000334895 B4DLN1 442 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 CYP2B6P20813 491 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 UBE2HP62256 183 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 FAM20AQ96MK3 541 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 FLRT1Q9NZU1 646 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 GABRQQ9UN88 632 aa24.32■■□□□ 1.48
TPM1-204ENST00000334895 RGS2P41220 211 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 SPECC1Q5M775 1068 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 EEPD1Q7L9B9 569 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 MPHOSPH6Q99547 160 aaKnown RBP24.31■■□□□ 1.48
TPM1-204ENST00000334895 APBA2Q99767 749 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 ZNF577Q9BSK1 485 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 TTC12Q9H892 705 aaPredicted RBP24.31■■□□□ 1.48
TPM1-204ENST00000334895 SLC5A4Q9NY91 659 aa24.31■■□□□ 1.48
TPM1-204ENST00000334895 A0A1W2PQ27 194 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 A0A1W2PQ64 194 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 A0A1W2PQD8 194 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 ATP9AO75110 1047 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 SNAI1O95863 264 aaPredicted RBP24.3■■□□□ 1.48
TPM1-204ENST00000334895 IGHA2P01877 340 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 TECP42680 631 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 FXR2P51116 673 aaKnown RBP eCLIP24.3■■□□□ 1.48
TPM1-204ENST00000334895 ITGB3BPQ13352 177 aaPredicted RBP24.3■■□□□ 1.48
TPM1-204ENST00000334895 KIF22Q14807 665 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 CCL14Q16627 93 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 USP49Q70CQ1 688 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 NLRX1Q86UT6 975 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 FBXO16Q8IX29 292 aaPredicted RBP24.3■■□□□ 1.48
TPM1-204ENST00000334895 SLFN12Q8IYM2 578 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 ZNF579Q8NAF0 562 aaKnown RBP24.3■■□□□ 1.48
TPM1-204ENST00000334895 ERO1AQ96HE7 468 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 KATNBL1Q9H079 304 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 PKD2L1Q9P0L9 805 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 VAV3Q9UKW4 847 aa24.3■■□□□ 1.48
TPM1-204ENST00000334895 SPATA31C2B4DYI2 1134 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 IPO5O00410 1097 aaKnown RBP24.29■■□□□ 1.48
TPM1-204ENST00000334895 PSMD10O75832 226 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 ICAM3P32942 547 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 PRKCZQ05513 592 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 SPIRE1Q08AE8 756 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 SEPT14Q6ZU15 432 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 IGSF22Q8N9C0 903 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 TINF2Q9BSI4 451 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 GOLPH3LQ9H4A5 285 aa24.29■■□□□ 1.48
TPM1-204ENST00000334895 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.29■■□□□ 1.48
TPM1-204ENST00000334895 DHX15O43143 795 aaKnown RBP24.28■■□□□ 1.48
TPM1-204ENST00000334895 MARCH6O60337 910 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 FLT3LGP49771 235 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 GNPTABQ3T906 1256 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 COL13A1Q5TAT6 717 aaPredicted RBP24.28■■□□□ 1.48
TPM1-204ENST00000334895 RESP18Q5W5W9 173 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 GPT2Q8TD30 523 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 PCDHA12Q9UN75 941 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 SYNGAP1Q96PV0 1343 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 GOLGA6L4A6NEF3 574 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 POTEMA6NI47 508 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 PP2D1A8MPX8 630 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 MAFGO15525 162 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 KCNA2P16389 499 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 CMA1P23946 247 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 LONP1P36776 959 aaKnown RBP24.28■■□□□ 1.48
TPM1-204ENST00000334895 SP2Q02086 613 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 MSL3Q8N5Y2 521 aaKnown RBP24.28■■□□□ 1.48
TPM1-204ENST00000334895 DOCK5Q9H7D0 1870 aa24.28■■□□□ 1.48
TPM1-204ENST00000334895 CDC25AP30304 524 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 LRCH2Q5VUJ6 765 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 OLFML2BQ68BL8 750 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 EPSTI1Q96J88 318 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 RIT2Q99578 217 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 BCAS3Q9H6U6 928 aa24.27■■□□□ 1.48
TPM1-204ENST00000334895 XRCC5P13010 732 aaKnown RBP24.26■■□□□ 1.47
TPM1-204ENST00000334895 TMEM266Q2M3C6 531 aa24.26■■□□□ 1.47
TPM1-204ENST00000334895 B3GNT9Q6UX72 402 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms