RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TBC1D7Q9P0N9 293 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 VAV2P52735 878 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 SLFN13Q68D06 897 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 ZNF622Q969S3 477 aaKnown RBP eCLIP19.65■□□□□ 0.744e-11■□□□□ 10.3
LRCH3-201ENST00000334859 ZDHHC15Q96MV8 337 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 NAP1L4Q99733 375 aaKnown RBP19.65■□□□□ 0.74
LRCH3-201ENST00000334859 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 UBXN6Q9BZV1 441 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 DEF6Q9H4E7 631 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 PLAGL2Q9UPG8 496 aa19.65■□□□□ 0.74
LRCH3-201ENST00000334859 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
LRCH3-201ENST00000334859 E9PMD0 336 aa19.64■□□□□ 0.74
LRCH3-201ENST00000334859 BEND6Q5SZJ8 279 aaPredicted RBP19.64■□□□□ 0.74
LRCH3-201ENST00000334859 COL23A1Q86Y22 540 aaPredicted RBP19.64■□□□□ 0.74
LRCH3-201ENST00000334859 IFIH1Q9BYX4 1025 aaKnown RBP19.64■□□□□ 0.74
LRCH3-201ENST00000334859 GLT8D2Q9H1C3 349 aa19.64■□□□□ 0.74
LRCH3-201ENST00000334859 ABCB6Q9NP58 842 aa19.64■□□□□ 0.74
LRCH3-201ENST00000334859 POTEB3A0JP26 581 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 DDTLA6NHG4 134 aaPredicted RBP19.64■□□□□ 0.73
LRCH3-201ENST00000334859 POTECB2RU33 542 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 MMP10P09238 476 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 HSPA1LP34931 641 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 RAD51AP2Q09MP3 1159 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 SEPT2Q15019 361 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 POTEBQ6S5H4 581 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 RRAGAQ7L523 313 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 DCAF4Q8WV16 495 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 SECISBP2LQ93073 1101 aaKnown RBP19.64■□□□□ 0.73
LRCH3-201ENST00000334859 MASTLQ96GX5 879 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 TSGA10Q9BZW7 698 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 ARHGAP20Q9P2F6 1191 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 BRWD3Q6RI45 1802 aa19.64■□□□□ 0.73
LRCH3-201ENST00000334859 ERICH4A6NGS2 130 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 TRAF5O00463 557 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 ZNF263O14978 683 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 ICA1Q05084 483 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 CCDC40Q4G0X9 1142 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 PAPD7Q5XG87 772 aaKnown RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 PODNQ7Z5L7 613 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 GPBP1Q86WP2 473 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 CAGE1Q8TC20 777 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 DHX36Q9H2U1 1008 aaKnown RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 ZCCHC17Q9NP64 241 aaKnown RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 SIPA1L1O43166 1804 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 LRRC53A6NM62 1247 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 HOXA7P31268 230 aaPredicted RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 STAT3P40763 770 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 KIF11P52732 1056 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 IKQ13123 557 aaPredicted RBP19.63■□□□□ 0.73
LRCH3-201ENST00000334859 HDXQ7Z353 690 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 CACNA2D4Q7Z3S7 1137 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 MMS19Q96T76 1030 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 SUGCTQ9HAC7 445 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 JADE2Q9NQC1 790 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 PI4KBQ9UBF8 816 aa19.63■□□□□ 0.73
LRCH3-201ENST00000334859 AKR1B10O60218 316 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 KRT18P05783 430 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 HNRNPH3P31942 346 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 EIF4A3P38919 411 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 SNAP25P60880 206 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 FAM193AP78312 1265 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 FKBP3Q00688 224 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 NELFCDQ8IXH7 590 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 CCDC65Q8IXS2 484 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 CCDC155Q8N6L0 562 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 NEK11Q8NG66 645 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 FGFBP2Q9BYJ0 223 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 COL4A3BPQ9Y5P4 624 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 NPHP3-ACAD11A0A0J9YXS1 232 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 MAP2K7O14733 419 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 CKAP4Q07065 602 aaKnown RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 ZCWPW2Q504Y3 356 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 HYIQ5T013 277 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 SMCR8Q8TEV9 937 aaPredicted RBP19.62■□□□□ 0.73
LRCH3-201ENST00000334859 ZHX3Q9H4I2 956 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 NYAP2Q9P242 653 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 FAM198AQ9UFP1 575 aa19.62■□□□□ 0.73
LRCH3-201ENST00000334859 ANO9A1A5B4 782 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 GDF11O95390 407 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 USP11P51784 963 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 USH1GQ495M9 461 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 PURBQ96QR8 312 aaKnown RBP19.61■□□□□ 0.73
LRCH3-201ENST00000334859 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
LRCH3-201ENST00000334859 PCDHA13Q9Y5I0 950 aa19.61■□□□□ 0.73
LRCH3-201ENST00000334859 POTEFA5A3E0 1075 aa19.6■□□□□ 0.73
LRCH3-201ENST00000334859 TUBBP07437 444 aa19.6■□□□□ 0.73
LRCH3-201ENST00000334859 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
LRCH3-201ENST00000334859 HERC4Q5GLZ8 1057 aaPredicted RBP19.6■□□□□ 0.73
LRCH3-201ENST00000334859 POTEGQ6S5H5 508 aa19.6■□□□□ 0.73
LRCH3-201ENST00000334859 POTEEQ6S8J3 1075 aa19.6■□□□□ 0.73
LRCH3-201ENST00000334859 MKL1Q969V6 931 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms