RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 IQCEQ6IPM2 695 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 TATDN1Q6P1N9 297 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 GMCL1P1Q8NEA9 526 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 VIPAS39Q9H9C1 493 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 PCDHA12Q9UN75 941 aa11.93□□□□□ -0.5
CCDC172-201ENST00000333254 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC66A2RUB6 948 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 EIF3JO75822 258 aaKnown RBP11.92□□□□□ -0.5
CCDC172-201ENST00000333254 FOSP01100 380 aaPredicted RBP11.92□□□□□ -0.5
CCDC172-201ENST00000333254 CRKP46108 304 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 USP14P54578 494 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC96Q2M329 555 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 EDRF1Q3B7T1 1238 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 BAP1Q92560 729 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 MASTLQ96GX5 879 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 PNKPQ96T60 521 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
CCDC172-201ENST00000333254 EPC1Q9H2F5 836 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 ATP8B3O60423 1300 aa11.92□□□□□ -0.5
CCDC172-201ENST00000333254 USP17L10C9JJH3 530 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 MAP9Q49MG5 647 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 Q4G0T1 1027 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 TTBK2Q6IQ55 1244 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 KCNK18Q7Z418 384 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 SECISBP2LQ93073 1101 aaKnown RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 GMCL1Q96IK5 515 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ACBD3Q9H3P7 528 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 DNAJC18Q9H819 358 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 CEP72Q9P209 647 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 TACC1O75410 805 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 CIITAP33076 1130 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 TRAF1Q13077 416 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 UBE2SQ16763 222 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ASTE1Q2TB18 679 aaPredicted RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 TMEM179Q6ZVK1 233 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PKNOX2Q96KN3 472 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 LACRTQ9GZZ8 138 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 PANK4Q9NVE7 773 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
CCDC172-201ENST00000333254 ZNF263O14978 683 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 PLSCR1O15162 318 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 IDEP14735 1019 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 KLK7P49862 253 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 KIF11P52732 1056 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 ECM1Q16610 540 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 DYMQ7RTS9 669 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 NOA1Q8NC60 698 aaKnown RBP11.9□□□□□ -0.5
CCDC172-201ENST00000333254 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 ERMNQ8TAM6 284 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
CCDC172-201ENST00000333254 ST7Q9NRC1 585 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
CCDC172-201ENST00000333254 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 MEIS2O14770 477 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 ENTPD3O75355 529 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 CYP3A4P08684 503 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 CYP11B2P19099 503 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 SREBF1P36956 1147 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 SLC1A4P43007 532 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 VSNL1P62760 191 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 SPIRE1Q08AE8 756 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 NFIAQ12857 509 aa11.89□□□□□ -0.51
CCDC172-201ENST00000333254 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 CERKLQ49MI3 558 aaPredicted RBP11.89□□□□□ -0.51
CCDC172-201ENST00000333254 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms