RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 V9GY48 417 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-203ENST00000333001 VCANP13611 3396 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 FIBPO43427 364 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 GGPS1O95749 300 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-203ENST00000333001 FAM47CQ5HY64 1035 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 ZNF697Q5TEC3 545 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-203ENST00000333001 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 RPUSD2Q8IZ73 545 aaKnown RBP14.07□□□□□ -0.16
CMTM1-203ENST00000333001 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 BRF1Q92994 677 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 SPATA33Q96N06 139 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 SENP7Q9BQF6 1050 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 AGXT2Q9BYV1 514 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 PPP1R12CQ9BZL4 782 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 CYP46A1Q9Y6A2 500 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
CMTM1-203ENST00000333001 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 MAFGO15525 162 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 HOXD8P13378 290 aaPredicted RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 CYP2C18P33260 490 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 NAPAP54920 295 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 MRPS9P82933 396 aaKnown RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 SMAD3P84022 425 aaKnown RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 FUT2Q10981 343 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 C9orf50Q5SZB4 431 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 RUFY3Q7L099 469 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 CCDC12Q8WUD4 166 aaPredicted RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 NOC4LQ9BVI4 516 aaKnown RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 MTIF3Q9H2K0 278 aaKnown RBP14.06□□□□□ -0.16
CMTM1-203ENST00000333001 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 RIC8AQ9NPQ8 531 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
CMTM1-203ENST00000333001 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 NOP56O00567 594 aaKnown RBP14.05□□□□□ -0.16
CMTM1-203ENST00000333001 PFKMP08237 780 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 CPA1P15085 419 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 CSF2RAP15509 400 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 UBA1P22314 1058 aaKnown RBP14.05□□□□□ -0.16
CMTM1-203ENST00000333001 CDC27P30260 824 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 EVCP57679 992 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 AKAP17AQ02040 695 aaKnown RBP14.05□□□□□ -0.16
CMTM1-203ENST00000333001 BFSP2Q13515 415 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 MCTP2Q6DN12 878 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 METTL7BQ6UX53 244 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 C7orf31Q8N865 590 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 GPRASP2Q96D09 838 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 IL23AQ9NPF7 189 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 FAM217BQ9NTX9 383 aaPredicted RBP14.05□□□□□ -0.16
CMTM1-203ENST00000333001 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
CMTM1-203ENST00000333001 BARHL2Q9NY43 387 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 PCDHA6Q9UN73 950 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 PCDHA8Q9Y5H6 950 aa14.05□□□□□ -0.16
CMTM1-203ENST00000333001 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
CMTM1-203ENST00000333001 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
CMTM1-203ENST00000333001 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 F2P00734 622 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 RFC2P35250 354 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 ADD1P35611 737 aaKnown RBP14.04□□□□□ -0.16
CMTM1-203ENST00000333001 PSEN2P49810 448 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 ADCY7P51828 1080 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 SP2Q02086 613 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 PTGISQ16647 500 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 PFKFB3Q16875 520 aaPredicted RBP14.04□□□□□ -0.16
CMTM1-203ENST00000333001 KAT2BQ92831 832 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.16
CMTM1-203ENST00000333001 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 NID2Q14112 1375 aa14.04□□□□□ -0.16
CMTM1-203ENST00000333001 SMCO2A6NFE2 343 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 STXBP3O00186 592 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 HAS3O00219 553 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
CMTM1-203ENST00000333001 PARNO95453 639 aaKnown RBP14.03□□□□□ -0.16
CMTM1-203ENST00000333001 FGBP02675 491 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 SCG2P13521 617 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 EPHB4P54760 987 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 MFSD10Q14728 455 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 KIAA0753Q2KHM9 967 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 HSDL1Q3SXM5 330 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 TMEM240Q5SV17 173 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
CMTM1-203ENST00000333001 GTF2IRD1Q9UHL9 959 aa14.03□□□□□ -0.16
CMTM1-203ENST00000333001 PRUNE2Q8WUY3 3088 aa14.02□□□□□ -0.16
CMTM1-203ENST00000333001 TMEM265A0A087WTH1 108 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 H3BRB1 525 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 CYP2C9P11712 490 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms