RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 KLRC4O43908 158 aa26.73■■□□□ 1.87
SOX1-201ENST00000330949 INPP4AQ96PE3 977 aaPredicted RBP26.73■■□□□ 1.87
SOX1-201ENST00000330949 CORO1CQ9ULV4 474 aaPredicted RBP26.73■■□□□ 1.87
SOX1-201ENST00000330949 F8W031 263 aaPredicted RBP26.73■■□□□ 1.87
SOX1-201ENST00000330949 PPARDQ03181 441 aa26.73■■□□□ 1.87
SOX1-201ENST00000330949 NKX1-1Q15270 411 aaPredicted RBP26.73■■□□□ 1.87
SOX1-201ENST00000330949 MICAL1Q8TDZ2 1067 aa26.73■■□□□ 1.87
SOX1-201ENST00000330949 CENPTQ96BT3 561 aa26.73■■□□□ 1.87
SOX1-201ENST00000330949 NDST4Q9H3R1 872 aa26.73■■□□□ 1.87
SOX1-201ENST00000330949 MCM7P33993 719 aa26.72■■□□□ 1.87
SOX1-201ENST00000330949 EEF2KMTQ96G04 330 aa26.72■■□□□ 1.87
SOX1-201ENST00000330949 L3MBTL3Q96JM7 780 aaPredicted RBP26.72■■□□□ 1.87
SOX1-201ENST00000330949 MAGOHP61326 146 aaKnown RBP26.72■■□□□ 1.87
SOX1-201ENST00000330949 ERVK-9P63128 1117 aa26.72■■□□□ 1.87
SOX1-201ENST00000330949 ITIH4Q14624 930 aa26.72■■□□□ 1.87
SOX1-201ENST00000330949 USP38Q8NB14 1042 aa26.72■■□□□ 1.87
SOX1-201ENST00000330949 MAGOHBQ96A72 148 aaKnown RBP26.72■■□□□ 1.87
SOX1-201ENST00000330949 LUC7LQ9NQ29 371 aaKnown RBP26.72■■□□□ 1.87
SOX1-201ENST00000330949 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
SOX1-201ENST00000330949 ECHS1P30084 290 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 L3MBTL1Q9Y468 752 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 V9GY48 417 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 NUP188Q5SRE5 1749 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 ZNF268Q14587 947 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 CCDC84Q86UT8 332 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 NLRP10Q86W26 655 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 FAM207AQ9NSI2 230 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 SSU72P8A0A1W2PR75 194 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 SNUPNO95149 360 aaKnown RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 PPP1R2P41236 205 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 ERMARDQ5T6L9 678 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 KLHL7Q8IXQ5 586 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 UBLCP1Q8WVY7 318 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 XPO6Q96QU8 1125 aaKnown RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 PSMD1Q99460 953 aa26.71■■□□□ 1.87
SOX1-201ENST00000330949 RNF41Q9H4P4 317 aaPredicted RBP26.71■■□□□ 1.87
SOX1-201ENST00000330949 PALMO75781 387 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 SLC1A4P43007 532 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 DNA2P51530 1060 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 GFPT1Q06210 699 aaPredicted RBP26.7■■□□□ 1.86
SOX1-201ENST00000330949 NPY5RQ15761 445 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 ANKRD40Q6AI12 368 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 SAMD1Q6SPF0 538 aaPredicted RBP26.7■■□□□ 1.86
SOX1-201ENST00000330949 RRAGAQ7L523 313 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 SLC4A9Q96Q91 983 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 NACAP1Q9BZK3 213 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 ARMT1Q9H993 441 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 ZBTB1Q9Y2K1 713 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 SIK3Q9Y2K2 1263 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 LRRC53A6NM62 1247 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 PRKAB2O43741 272 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 ASTE1Q2TB18 679 aaPredicted RBP26.7■■□□□ 1.86
SOX1-201ENST00000330949 MAGEB6Q8N7X4 407 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 FAM129AQ9BZQ8 928 aa26.7■■□□□ 1.86
SOX1-201ENST00000330949 BSDC1Q9NW68 430 aaPredicted RBP26.7■■□□□ 1.86
SOX1-201ENST00000330949 CPSF2Q9P2I0 782 aaKnown RBP26.7■■□□□ 1.86
SOX1-201ENST00000330949 MYH7BA7E2Y1 1941 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 hCG_1642624A0A1W2PR95 340 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 ASAP2O43150 1006 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 MBD4O95243 580 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 STARD3NLO95772 234 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 CSF1RP07333 972 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 CTSWP56202 376 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 TBC1D1Q86TI0 1168 aaPredicted RBP26.69■■□□□ 1.86
SOX1-201ENST00000330949 PARD3BQ8TEW8 1205 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 AGAP11Q8TF27 550 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 ZNF570Q96NI8 536 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 TMEM59LQ9UK28 342 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 ALADP13716 330 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 FUT2Q10981 343 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 NAALADL2Q58DX5 795 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 MEI1Q5TIA1 1274 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 PIK3AP1Q6ZUJ8 805 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 SLAIN2Q9P270 581 aa26.69■■□□□ 1.86
SOX1-201ENST00000330949 CTNND1O60716 968 aaKnown RBP26.68■■□□□ 1.86
SOX1-201ENST00000330949 ZPR1O75312 459 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 PECAM1P16284 738 aaPredicted RBP26.68■■□□□ 1.86
SOX1-201ENST00000330949 SSR1P43307 286 aaKnown RBP26.68■■□□□ 1.86
SOX1-201ENST00000330949 FBXL5Q9UKA1 691 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 RBAK-RBAKDNI3L0D1 243 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 EPHB6O15197 1021 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 FTCDO95954 541 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 GIGYF2Q6Y7W6 1299 aaKnown RBP26.68■■□□□ 1.86
SOX1-201ENST00000330949 CACNA2D4Q7Z3S7 1137 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 MIGA1Q8NAN2 632 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 SPDYE1Q8NFV5 336 aaPredicted RBP26.68■■□□□ 1.86
SOX1-201ENST00000330949 MMRN2Q9H8L6 949 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 RIC1Q4ADV7 1423 aa26.68■■□□□ 1.86
SOX1-201ENST00000330949 ENO4A6NNW6 628 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 GSG1L2A8MUP6 293 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 KRT71Q3SY84 523 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 KBTBD4Q9NVX7 518 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 CES2O00748 559 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 LUC7L3O95232 432 aaKnown RBP26.67■■□□□ 1.86
SOX1-201ENST00000330949 VWA3BQ502W6 1294 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 ZBTB10Q96DT7 871 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 SLC4A4Q9Y6R1 1079 aa26.67■■□□□ 1.86
SOX1-201ENST00000330949 CCND1P24385 295 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 PCDHGC5Q9Y5F6 944 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 DIAPH2O60879 1101 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms